Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03446 ATGGGATCAGAAACCGAAGTGAAGCTTCCAATCATTGACTTCTCCAAATTGGACTTGGAATCCAATGTTGCAGAGTGGGAATCAGTGAAATCCCAAGTTCACAAAGCACTTGCAGAGTATGGTTCCTTTGAGGCTGTGTTTGATAAAGTCCCTTCGGATTTTCGAAAAGCCATATTTCTTGAAGTGGAAGAGCTATTCGATCTCCCTTTAGAAACCAAGCAACGCGTTGCGTCTAGTAGGCCATACCGTGGTTATGTTCAGCCTGTTGAAATCTATGAGAGCATGGGAATTGAGGATGCTAATGTTCATGAGAAAGTGGAAAATTTGATCAAGATCTTATGGCCACAAGGAAAACCAAGTTTTAGCAAAAATCTGCTATTCTTCACTGAGCAAGTGTCAAGGTTGGATCAGATGATTAGGAAGATGATTTTGGAGAGTTTAGGTGTTGAAAAGTATTTGGATGAGCACATGAACTCTACAAATTACCTTGCACGGCTTATCAAGTACGAAGGCCCTCAAACTAATGAACCAAAAGTTGGGATAACAGATCACACAGATAAGAACTTATTGACCATCTTATGTCAAAATCAAATTGATGGTTTAGAGATACAGACCAAAAGTGGAGACTGGATCAAATACAAGCCCTCAACATCAACCAGTTTTGTTGTTGTCACCGGAGACACACTTTATGCATGGACTAATGGAAGGGTGCACACACCGTTTCACCGAGTGATGATGACTGGAAATGAGACAAGGTTCACTATTGGACTGTTCACAGTTCCAAAGTCAGGGTTCGTAATAAAGGCCCCAGATGAGCTTGTGACTGAGGAGCACCCTTTGCTTTTCAAGCCCTTTGTCCAGAGTGAGTTCATGAAGTTTGTTTACTCTTCTGAGAAAACAAAAAATGCTCTGAAGGTTTATTGTGGTGTTTGA 933 0.4116 MGSETEVKLPIIDFSKLDLESNVAEWESVKSQVHKALAEYGSFEAVFDKVPSDFRKAIFLEVEELFDLPLETKQRVASSRPYRGYVQPVEIYESMGIEDANVHEKVENLIKILWPQGKPSFSKNLLFFTEQVSRLDQMIRKMILESLGVEKYLDEHMNSTNYLARLIKYEGPQTNEPKVGITDHTDKNLLTILCQNQIDGLEIQTKSGDWIKYKPSTSTSFVVVTGDTLYAWTNGRVHTPFHRVMMTGNETRFTIGLFTVPKSGFVIKAPDELVTEEHPLLFKPFVQSEFMKFVYSSEKTKNALKVYCGV 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03446 310 FunFam Probable 2-oxoglutarate-dependent dioxygenase AOP1.2 2 299 - -
Spst1g03446 310 Pfam non-haem dioxygenase in morphine synthesis N-terminal 9 88 IPR026992 -
Spst1g03446 310 SUPERFAMILY Clavaminate synthase-like 7 297 - -
Spst1g03446 310 Gene3D - 1 302 IPR027443 -
Spst1g03446 310 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 160 261 IPR005123 -
Spst1g03446 310 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 9 292 - -
Spst1g03446 310 Pfam 2OG-Fe(II) oxygenase superfamily 156 259 IPR044861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03446 Spst-Chr1 43237324 43238532 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g03446 3 290 Glycosyltransferase AT5G59530 22.549 3.85e-11 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03446 - - gmx:100817152 533.872
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst7g00370 7 2916126 2917228 Spst1g03446 1 43237324 43238532 PCT