Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00958 ATGAATGAATCTTCTTTGCAAATAGCAATGTTTCCATGGTTTGCAATGGGACATTTAACACCATATCTCCACCTCTCCAACAAATTAGCAAAGAGGGGACACAAAATCTCCTTCTTCATCCCCAGAAGAACACAATCCAAGTTAGAGCAATTCAACCTCTTCCCACATCTCATCACCTTTTTTCCTATCAATGTTCCTCATGTTGAAGGCCTTCCTCATGGCGCAGAAACCACTTCTGATGTGTCTTTCTCTTTGGGCCCACTCATTATGACAGCTATGGATCGCACTGAGAGGGATATAGAGCTTCTTCTCATAGAGCTAAAGCCACAAATTGTTTTCTTTGACTTCACATATTGGCTACCCAACATGACTCGTCGCTTGGGGATCAAATCTTTTCATTACTTGATCGTCAGTCCTGCGACAGTATCGTACTGTGCATCCCCTCCAAGGATGAACCACAGTGGTAGCTTAACTGAAATTGACCTTATGAAACCCCCTCTTGGTTACCCTATATCATCCATCAAACTCCATGCACATGAAGCAAAGTTCCTTGCTTCGAAGAGGAACTGGGAGTTTGGTAGTGGTGTTCTCTTTTATGACCGCCTCTATAGTGGTCTAACCCAGTCAGATGCAATTGGATTCAAAGGTTGCAGTGAAATTGAGGGACCTTTTGTTGATTACCTTGAGGAGCAATTTGGGAAGCCTGTTCTCCTTTCTGGACCTATCATACCCGAGCGACCCAACGCTGTTTTAGAGGAAAAATGGAGTGCATGGCTTGGAAGCTTCAAGGATGGTTCTGTGATTTTTTGTGCACTAGGGAGTGAATGGAAATTAACTCATGGTCAGTTCAAAGAATTGTTGTTGGGTCTTGCACTTACATGGCTCCCATTTTTGGTTGTTCTGAAAATTCCTATTGGGTTTGAGACAATGGAAGATGCTCTCCCAGAAGGGTTTAAGGAAAGGGTTGAAGGGAGAGGAATTGTCCACAGTGGATGGATACAACAACAGTTGATTTTGGAACACCCATCAGTGGGTTGCTTCATAACACACTGTGGTGCTGGGTCATTGACTGAGGCACTGGTAAATAAGTGTCAAATGGTGTTACTGCCTCAAGTAGATGGCGATCATATCATTAATGCAAGGATGATGGGTGGAAACTTGAAGGTTGGGGTTGAAGTGGAGAAGGGTGAAGAAGATGGTTGGTTCACAAAGGAGAGTGTAAGCAAAGCAGTGAAAATGGTGATGGATGAGGAGAATGAAGTTGGCAGAGAAGTGAGGGAAAATCATGCAAAATTGAAGAATTTCTTGGTACATGATTTAGAAACGATCTGTGTTGATAACTTTTGTCAGAAGCTTCAAGATTTACTCGTGTGA 1374 0.4294 MNESSLQIAMFPWFAMGHLTPYLHLSNKLAKRGHKISFFIPRRTQSKLEQFNLFPHLITFFPINVPHVEGLPHGAETTSDVSFSLGPLIMTAMDRTERDIELLLIELKPQIVFFDFTYWLPNMTRRLGIKSFHYLIVSPATVSYCASPPRMNHSGSLTEIDLMKPPLGYPISSIKLHAHEAKFLASKRNWEFGSGVLFYDRLYSGLTQSDAIGFKGCSEIEGPFVDYLEEQFGKPVLLSGPIIPERPNAVLEEKWSAWLGSFKDGSVIFCALGSEWKLTHGQFKELLLGLALTWLPFLVVLKIPIGFETMEDALPEGFKERVEGRGIVHSGWIQQQLILEHPSVGCFITHCGAGSLTEALVNKCQMVLLPQVDGDHIINARMMGGNLKVGVEVEKGEEDGWFTKESVSKAVKMVMDEENEVGREVRENHAKLKNFLVHDLETICVDNFCQKLQDLLV 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00958 457 FunFam Glycosyltransferase 2 254 - -
Spst5g00958 457 PANTHER GLYCOSYLTRANSFERASE 7 437 - -
Spst5g00958 457 FunFam Glycosyltransferase 255 438 - -
Spst5g00958 457 Gene3D Glycogen Phosphorylase B; 1 256 - -
Spst5g00958 457 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 4 438 - -
Spst5g00958 457 Gene3D Glycogen Phosphorylase B; 257 437 - -
Spst5g00958 457 CDD GT1_Gtf-like 8 433 IPR002213 GO:0008194
Spst5g00958 457 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 331 418 IPR002213 GO:0008194
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00958 Spst-Chr5 9035615 9036988 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g00958 4 456 Glycosyltransferase AT5G54010 47.033 3.97e-149 431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00958 K22794 - gmx:100808470 798.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00958 5 9035615 9036988 Spst11g00816 11 32257045 32258430 PCT
Spst11g00810 11 32122195 32126122 Spst5g00958 5 9035615 9036988 PCT