Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00816 ATGGACGCTGGTATGTCGCAGTTGCACATGGCAATGTATCCATGGTTTGCGATTGGACACATAACCGCATACCTCCACCTAGCCAACAAATTAGCAGAAAGAGGACACAAAATTTCCTTCATTTTACCCAAACGAACAAAGGCAAGGGTGGAACATATCAACCTCCATCCACAGTTAATAAGCTTCATCCCCATCACCATTCCCCCAGTTGATGGCCTTCCTCCTCATGCAGAAACTATTTTCGATGCTTCCATCTCCTTAGGCACGTTTATTATGACTGCAATGGATCGCACGGAGAAGGACATTGAGCTAATTTTACTTGAGCTGAAACCCAACATCGTTTTCTTTGATTATACATGTTGGATGCCAAACTTGACTCGGAGCTTAGGCATCAAGTCTGTTCATTACATAACCCTAAGCATGATATTTGAATCTTATATGGAATGCATGGAGAAGCAGTTTCGGGAAAATAATTCAGTTGGAAATGAGCTGAATCTGGAGAATCCCCCAGCTGGTTTCCCAGATCCTTCCATCAAGCTTCAGGCTCACGAGGTTCGACAATTAACTTCAATCGTGAATTCAGAGTTTGGCAGTGGTGTTCGCTACTATGATCGCATCAGCACCAGCACCAGATTGTCAGATGCAGTGGCATTTAGAAGTTGTAGAGAAATTGAGGAACCATATGCGGACTTTCTTGAAAGTTCTTATGGGAAGCCTTTGTGGCTTTCAGGGCCTGTCCTACCTGAGGCACACGCATTCACTTTGGAAGAAAAATGGGCTGAATGGCTTTCAGGATTCAAGGATGGATCGGTGGTGTACTGTGCATTTGGAAGTGAATGCAGGCTACATCAAGATCAGCTCAAGGAACTGTTGCTGGGTCTTGAGTTAACAGGTTTTCCATTTCTTGCAGCCCTTAAAGCCCCTGTTGGATTTGAGTCCGTTGAAGCAGCTATGCCAAAAGGGTTCCATGAGAGGGTTCGAGGAAGAGGCATTGTCCATGGGGGTTGGGTTCAGCAGACACTCATTCTTGACCACCCTTCTGTCGGGTGCTTCATTACCCATTGTGGAGCTGCATCTTTACTAGAGGCACTTGTGAGCAGGTGTCAGATTGTGGTGTTACCAAATTTTATTGACCAGCTCCTTAATGCGAGGATGATAAGCAGGAGCATAAAGGCAGGTGTTCAAGTGGAGAAAGGTGAAGAAGATGGTTTGTTCACAAAGGAGAGTGTCTGCAGAGCTGTTAAGACTGTGATGGATTTTGAGAGTGAAGTCGGAAAGGAGGTCAGAGAAAACCATTTAAAATTGAGAAACCTCTTACTCACCAAGGATTTGGAGAAGTCTTACATTGATAGTTTTTGTCATAAGCTGCAAGAATTAGTTGGGTAA 1386 0.4444 MDAGMSQLHMAMYPWFAIGHITAYLHLANKLAERGHKISFILPKRTKARVEHINLHPQLISFIPITIPPVDGLPPHAETIFDASISLGTFIMTAMDRTEKDIELILLELKPNIVFFDYTCWMPNLTRSLGIKSVHYITLSMIFESYMECMEKQFRENNSVGNELNLENPPAGFPDPSIKLQAHEVRQLTSIVNSEFGSGVRYYDRISTSTRLSDAVAFRSCREIEEPYADFLESSYGKPLWLSGPVLPEAHAFTLEEKWAEWLSGFKDGSVVYCAFGSECRLHQDQLKELLLGLELTGFPFLAALKAPVGFESVEAAMPKGFHERVRGRGIVHGGWVQQTLILDHPSVGCFITHCGAASLLEALVSRCQIVVLPNFIDQLLNARMISRSIKAGVQVEKGEEDGLFTKESVCRAVKTVMDFESEVGKEVRENHLKLRNLLLTKDLEKSYIDSFCHKLQELVG 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00816 461 Gene3D Glycogen Phosphorylase B; 3 261 - -
Spst11g00816 461 FunFam Glycosyltransferase 259 441 - -
Spst11g00816 461 Gene3D Glycogen Phosphorylase B; 262 440 - -
Spst11g00816 461 FunFam Glycosyltransferase 4 258 - -
Spst11g00816 461 ProSitePatterns UDP-glycosyltransferases signature. 336 379 IPR035595 -
Spst11g00816 461 CDD GT1_Gtf-like 8 436 IPR002213 GO:0008194
Spst11g00816 461 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 4 441 - -
Spst11g00816 461 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 335 422 IPR002213 GO:0008194
Spst11g00816 461 PANTHER GLYCOSYLTRANSFERASE 8 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00816 Spst-Chr11 32257045 32258430 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00816 6 460 Glycosyltransferase AT5G54010 45.614 6.82e-150 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00816 K22794 - aprc:113859656 543.502
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g00816 11 32257045 32258430 Spst11g00816 11 32257045 32258430 ECH
Spst5g00958 5 9035615 9036988 Spst11g00816 11 32257045 32258430 PCT