Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00810 ATGGATGCAGCTTCTTTGCACATAACAATGTATCCATGGTTTGCTATGGGGCACTTAACCCCATTTCTCCACCTTGCCAACAAGTTAGCCAAAAGGGGACACAAAATCTCATTCTTCATACCCAGAAGAACACAAGCCAAATTAGAAAACCTCAACCTTCACCCAAGTCTCATCACTTTTGTCCCTGTCATTGTTCCTCACGTTGATGGTCTTCCCTATGATGCAGAAACTACTTCAGATGTTCCCTCATCTTTGTTCCCACTTATTGCCTCTGCCATGGATCTCACAGAGAAGGATATTGAACTTCTCATGTTTCCTGATTGTTCTATCAAGCTGCATGAACACGAAGTTAGGTTCCTTGGTGCAGGAAGGAAACTGGAGTCCTCTTCGCCCGAGTCATCCAACTCTACTTTGGAAGAAAAATGGGGTGAATGGCTTGGTAGATTCAAGGCTGGTTCCGTGATTTACTGTGCATTTGGAAGTGAAAACTCCTTACAGCAAAACCAATTGCAAGAATTGTTATCGGGTCTTGAGCTAACTGGAATGCCATTTCTTGCAGCACTTAAGCCTCCTACTGAGTTTGAGTCCATTGAGGACGCTCTCCCAAAAGGGTTCAAAGAAAGGGTTCAAGAAAGAGGTGTTTTATATGGGGGGTGGGTGCAGCAACAGTTGATCTTGGAACACCCTTCTATTGGGTGCTTCATAACACACTGCGGTGCAGCTTCTCTAACTGAGGCACTTGTGAACCAGTGCCAGTTGGTGCTGTTACCCTGCCTTGGTTCTGATTTCATCAACGCAAGAACCATGGGTGGAAAATTGAGGGTAAGAGTGGAAGTGGAAAAAGGTGAAGAAGATGGTTTGTTCACCCACAGGAAAGTGTGTGCAAAGCTGTGA 894 0.4508 MDAASLHITMYPWFAMGHLTPFLHLANKLAKRGHKISFFIPRRTQAKLENLNLHPSLITFVPVIVPHVDGLPYDAETTSDVPSSLFPLIASAMDLTEKDIELLMFPDCSIKLHEHEVRFLGAGRKLESSSPESSNSTLEEKWGEWLGRFKAGSVIYCAFGSENSLQQNQLQELLSGLELTGMPFLAALKPPTEFESIEDALPKGFKERVQERGVLYGGWVQQQLILEHPSIGCFITHCGAASLTEALVNQCQLVLLPCLGSDFINARTMGGKLRVRVEVEKGEEDGLFTHRKVCAKL 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00810 297 PANTHER GLYCOSYLTRANSFERASE 6 108 - -
Spst11g00810 297 FunFam Glycosyltransferase 141 297 - -
Spst11g00810 297 Gene3D Glycogen Phosphorylase B; 1 107 - -
Spst11g00810 297 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 4 295 - -
Spst11g00810 297 Gene3D Glycogen Phosphorylase B; 140 295 - -
Spst11g00810 297 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 214 272 IPR002213 GO:0008194
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00810 Spst-Chr11 32122195 32126122 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00810 131 289 Glycosyltransferase AT5G54010 57.500 1.21e-59 195
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00810 K22794 - qsa:O6P43_000788 348.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g00810 11 32122195 32126122 Spst11g00810 11 32122195 32126122 ECH
Spst5g00959 5 9038828 9039937 Spst11g00810 11 32122195 32126122 PCT
Spst11g00810 11 32122195 32126122 Spst5g00958 5 9035615 9036988 PCT