Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00211 ATGCCCCTACCATCTTCTCTCAGACCATTTCTTCTCTTCCCCAAATCTCTCTCTAAACCTTTCTCTCAACTCATTTCAATCAAACAAAACCAGATTTCTTATCTTTTACAAATGAAACCTATTGAAATGGAAAGCAAGGCACCCATACTAGCCAAGAAAGTCTGCAACATGGTTCGTGTCATGTTCTTCATGATGAGAAAAGGCATATTCAAGAGCAAACTCATGATGGACCTCGACGTCATGCTCAAACGCCGCGGCAAGCTCGCCGGAAAAGCCATTGCCAACCTAATGTCCCACCACCACCACCACCACCACCACGGCGGCTCCCACCACTCCCACCTTCAATCCTCCGCCCCGAGGGAGTACGAGTTCAGCTGCAGTAACACGCCCAACGCCTTCTCCTTCCCCGCAATAGGGAAGCGCCACCGCCACTTTTTCGCTTGCGTCCACGCGCCTCCCACGCAGGACGACGACGCCGTGACGGTGAACGCGGTGAAGACGGTGTTGGAGATGCTGAACAACGACGTTAAGGTCGAGATGACGTCGTCCCCTGCGCTGCCAGGGTTTGGGCGGAGCCCCATGGTGAGGCAGCTGAGGGTGACGGACTCGCCGTTCCCACTGCGGGATTCCGAGCAAGACAACGACCACCAGGTCGATAAGGCTGCGGAAGAGTTCATTAAGAGGTTTTACAAGGAGTTGAAGAAGCAGGATTAA 714 0.5336 MPLPSSLRPFLLFPKSLSKPFSQLISIKQNQISYLLQMKPIEMESKAPILAKKVCNMVRVMFFMMRKGIFKSKLMMDLDVMLKRRGKLAGKAIANLMSHHHHHHHHGGSHHSHLQSSAPREYEFSCSNTPNAFSFPAIGKRHRHFFACVHAPPTQDDDAVTVNAVKTVLEMLNNDVKVEMTSSPALPGFGRSPMVRQLRVTDSPFPLRDSEQDNDHQVDKAAEEFIKRFYKELKKQD 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00211 237 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED 46 236 - -
Spst5g00211 237 Pfam Cotton fibre expressed protein 216 236 IPR008480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00211 Spst-Chr5 1815845 1816558 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00211 - - gmx:100802625 295.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g02323 4 63963185 63963781 Spst5g00211 5 1815845 1816558 ECH
Spst3g00881 3 12250311 12250910 Spst5g00211 5 1815845 1816558 ECH
Spst4g02627 4 66243353 66243883 Spst5g00211 5 1815845 1816558 ECH
Spst5g00211 5 1815845 1816558 Spst5g00211 5 1815845 1816558 ECH
Spst5g00211 5 1815845 1816558 Spst4g02323 4 63963185 63963781 PCT