Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01708 ATGGCTGGTTCAGAACCTGTTAGTGCAAAGGGAGAGACTAGGACTGTGGATGTTGCACCAAGGAAGCCCCGGATTCTACTTGCTGCTAGTGGGAGTGTTGCTGCTGTCAAATTTGCAAATCTTTGTCATTGTTTCTCTGAATGGGCAGATGTAAGAGCAGTTGCCACAAATGCATCTTTGCATTTCATTGATAAAGCTTCAATGCCCAAGGATGTAGTTTTATACACCGATGACGATGAGTGGTCTAGGTGGATGAAACTTGGTGATAATGTGCTTCACATTGAGCTTCGCAACTGGGCTGATATCATGGTCATTGCTCCATTATCAGCAAACACCCTTGGCAAGATTGCTGGAGGGTTGTGTGACAATCTACTGACATGCATCGTGCGAGCCTGGGACTACAACAAGCCATTCTTTGTTGCACCAGCCATGAACACTTTTATGTGGAACAATCCTTTCACCGAGCGGCATCTCATCTCCATTGATGAGCTTGGTATTTCTCTCATCCCTCCTGTTACAAAGCGGTTAGCTTGTGGAGATTATGGCAATGGTGCTATGGCTGAACCCTCTACCATTTACTCAACTGTAATGCTCTTCTATGAGTCAAGGGCTCAGCAAGGTCATGGTGATATCTGA 636 0.456 MAGSEPVSAKGETRTVDVAPRKPRILLAASGSVAAVKFANLCHCFSEWADVRAVATNASLHFIDKASMPKDVVLYTDDDEWSRWMKLGDNVLHIELRNWADIMVIAPLSANTLGKIAGGLCDNLLTCIVRAWDYNKPFFVAPAMNTFMWNNPFTERHLISIDELGISLIPPVTKRLACGDYGNGAMAEPSTIYSTVMLFYESRAQQGHGDI 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01708 211 PANTHER HOMO-OLIGOMERIC FLAVIN CONTAINING CYS DECARBOXYLASE FAMILY 18 204 - -
Spst4g01708 211 Pfam Flavoprotein 24 196 IPR003382 GO:0003824
Spst4g01708 211 SUPERFAMILY Homo-oligomeric flavin-containing Cys decarboxylases, HFCD 22 199 IPR036551 GO:0003824
Spst4g01708 211 FunFam Phosphopantothenoylcysteine decarboxylase 17 208 - -
Spst4g01708 211 Gene3D - 22 210 IPR036551 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01708 Spst-Chr4 56996339 56997503 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01708 K01598 - gmx:100499989 402.134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g00980 1 12046967 12048959 Spst4g01708 4 56996339 56997503 PCT
Spst4g01708 4 56996339 56997503 Spst1g00978 1 12033041 12034298 PCT