Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g00980 ATGATTGCTAGTTTTGTTCAGTCTGAGGCAGTATATGCTGTTCGGAGGAAGCCTCGGATTCTACTTGCTGCTTGTGGGTGCAGTGATGCTGCAAAATTTGGGCTTCTTTGTAAATATTTTTCAGTATGGGCAAAAGTAGGTGTTGTTTTGACACAATCATCGTTACAATTTATTAATGCAGAACCAATGGCCCATCTATATGTTACTTGTGCTGATTCCTCCATTGAGTATCTTGAATGGGCTGATGTCATGGTCATTGCTCCATTGTCGGCAAATACCCTTGCTAAGATTGCGAAAGGTTTATCTGACAACCTAGTGACAGAAATTGTGCGAGGATGGGACTATGACAAGGCACTTTATGTTGCACCATCGATGGACCCTATTATATGGAATGATCCTTTGACAGCACAACAATGTAATAACATTGAAAAACTTGGCATTAGTATCATCATTCCACCCTCACCTACAGGAGAAAATGAGTTTTGTCAAATGGCTGAACCTTCGGAAATATCTTACACTATATATATTGGCCCCTCCAGCTACACGCGGTTTCATGGACTTTGA 564 0.4096 MIASFVQSEAVYAVRRKPRILLAACGCSDAAKFGLLCKYFSVWAKVGVVLTQSSLQFINAEPMAHLYVTCADSSIEYLEWADVMVIAPLSANTLAKIAKGLSDNLVTEIVRGWDYDKALYVAPSMDPIIWNDPLTAQQCNNIEKLGISIIIPPSPTGENEFCQMAEPSEISYTIYIGPSSYTRFHGL 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g00980 187 Pfam Flavoprotein 19 172 IPR003382 GO:0003824
Spst1g00980 187 SUPERFAMILY Homo-oligomeric flavin-containing Cys decarboxylases, HFCD 15 174 IPR036551 GO:0003824
Spst1g00980 187 Gene3D - 5 176 IPR036551 GO:0003824
Spst1g00980 187 PANTHER HOMO-OLIGOMERIC FLAVIN CONTAINING CYS DECARBOXYLASE FAMILY 14 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g00980 Spst-Chr1 12046967 12048959 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g00980 K01598 - gmx:100812130 157.532
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g00980 1 12046967 12048959 Spst4g01708 4 56996339 56997503 PCT