Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g00978 ATGGATTGCTCTGATCCTGCAAGTAAAAAGGCAAAATCTGCGACAGGGTGTGCTATTAGGAGGAAGCCTCGGATTCTACTTGCTGCTTGTGGAAGTGTTGCTGCTGTAAAATTTGGGCATGTTTGTCGATGCTTTGCAGAATGGGCGGAAGTAAGGGCACTAGTCACAAAATCAGCCTTGCGTTTTATTTCTGAACAAACATTTCCCAAGGATATTAATGTATTTTGGGATGATAATGACTGGAACACTTGGAAAAGGATAGGCGATCGTGTGCTTCATATTGAGCTTATTAGATGGGCTGAAATTCTGGTCATTGCTCCATTGTCAGCAAATACTCTTGGCAAGATCGTGGCAGGGTTATGTGACAATCTTCTGACATGTATTGTGAGAGCATGGGACTACAGCAAGCCACTTTTTGTTGCACCATCCATGAACTCTATTATGTGGAAAAACCCTTTCACAGAGCGGCATTGCATTGGCATTGATGAGCTTGGCATCTCTCTCATCCCACCTGTCACATATAGGAAAGCTAATGGGGACATTGAGCATGGAGCAATGGCTGAACCCTCTACAATATACTCGACTGTGAGACTTTTTTATGAGTTAAAGATGCAGAAAAATGAATAG 627 0.4274 MDCSDPASKKAKSATGCAIRRKPRILLAACGSVAAVKFGHVCRCFAEWAEVRALVTKSALRFISEQTFPKDINVFWDDNDWNTWKRIGDRVLHIELIRWAEILVIAPLSANTLGKIVAGLCDNLLTCIVRAWDYSKPLFVAPSMNSIMWKNPFTERHCIGIDELGISLIPPVTYRKANGDIEHGAMAEPSTIYSTVRLFYELKMQKNE 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g00978 208 PANTHER HOMO-OLIGOMERIC FLAVIN CONTAINING CYS DECARBOXYLASE FAMILY 20 204 - -
Spst1g00978 208 Gene3D - 22 208 IPR036551 GO:0003824
Spst1g00978 208 Pfam Flavoprotein 24 197 IPR003382 GO:0003824
Spst1g00978 208 SUPERFAMILY Homo-oligomeric flavin-containing Cys decarboxylases, HFCD 22 198 IPR036551 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g00978 Spst-Chr1 12033041 12034298 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g00978 K01598 - gmx:100782568 355.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g01708 4 56996339 56997503 Spst1g00978 1 12033041 12034298 PCT