Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03967 ATGGCATCCGGAAAGAAGCATTTTGTTCTGGTGCATGGGGCTGGCCATGGAGCTTGGTGTTGGTACAAGCTGAAGCCACTCTTGGAATCTGCAGGTCACAGGGTCACAGTGCTGGACCTTGCAGCTTCTGGCATCAACTTGCAGAAGATAGAAGATGTTGATACTTTCTCACAGTATTCGGAGCCTTTGTTGCAGCTATTGGCAACAATTCCCCCAAATGAAAAGGTGATTCTAGTGGGTCACAGCCTTGGGGGACTCAACATAGCACTTGCCATCGACAAATTCCCAGAAAAAATTGCTGTTGGTGTTTTCTTAACAGCTCTAACTCCAGACATTGAACACAAGCCATCCTATGTCTCAGAAAAGCACCTTGAGAATACTCCACCTCAGAATTGGTTGGACTGTGAATTCTTCCAGAGTGGAAACAAAACAGTAGTTGTTTTTGGTCCCATATTCTCTTCCACCAAACTCTACCAATGCTCCTCCGTTGAGGTACAATTATTACATGTTGCAACCTTCTATTCCATTCACTATTGCACGTCGAAAGAAGAATATGTTTTTCTTCTTTATGAAAACAAAAATAAGGATTGGATTTTGCAGGATATAGAATTGGCCAAAACTTTAGTGAGGCCAAGTTCCCTCTTTATCGAAGACTTGTCTCAGCAGAATTTTTTTTCTAAAGAGAGATATGGGTCAGTTCCTCTTGCATCTATTGTTTGCACTGAGGACCTTATAATTCCATTGAATTTTCAGCACTGGATGATTCAAAATGCTGGCGTCAATGACGTTGTAGAGATCAAAGGTGCAGATCATATGCCTATGCTTAGCAAGCCACAAGAACTATGCGATTCTCTCCTGCAAATGGCTGCTAAATATGCATGA 882 0.4218 MASGKKHFVLVHGAGHGAWCWYKLKPLLESAGHRVTVLDLAASGINLQKIEDVDTFSQYSEPLLQLLATIPPNEKVILVGHSLGGLNIALAIDKFPEKIAVGVFLTALTPDIEHKPSYVSEKHLENTPPQNWLDCEFFQSGNKTVVVFGPIFSSTKLYQCSSVEVQLLHVATFYSIHYCTSKEEYVFLLYENKNKDWILQDIELAKTLVRPSSLFIEDLSQQNFFSKERYGSVPLASIVCTEDLIIPLNFQHWMIQNAGVNDVVEIKGADHMPMLSKPQELCDSLLQMAAKYA 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03967 293 Pfam Alpha/beta hydrolase family 8 282 IPR000073 -
Spst3g03967 293 FunFam (S)-hydroxynitrile lyase 3 180 - -
Spst3g03967 293 SUPERFAMILY alpha/beta-Hydrolases 4 288 IPR029058 -
Spst3g03967 293 Gene3D alpha/beta hydrolase 2 293 IPR029058 -
Spst3g03967 293 PANTHER METHYLESTERASE FAMILY MEMBER 5 289 IPR045889 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03967 Spst-Chr3 90107750 90109732 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03967 5 165 Miscellaneous Gene Families AT5G10300 54.545 3.33e-55 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03967 - - gmx:100790419 379.022
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03967 3 90107750 90109732 Spst3g03967 3 90107750 90109732 ECH
Spst3g03967 3 90107750 90109732 Spst3g03967 3 90107750 90109732 PCT
Spst3g03967 3 90107750 90109732 Spst3g03968 3 90122925 90131406 PCT
Spst3g03964 3 90061301 90063649 Spst3g03967 3 90107750 90109732 PCT