Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03964 ATGGCATCAGGAAGTAAGCATTTTGTTCTGGTGCATGGGGCTTGCCATGGAGCTTGGTGTTGGTACAAGCTGAAGCCCCTCTTGGAATCTGCAGGTCACAGGGTCACAGTGCTGGACCTTGCAGCTTCTGGCATCAACTTGCAGAAGATAGAAGATGTTGATACTTTCTCACGGTATTCGGAGCCTTTGTTGCAGCTATTGGCAACAATTCCCCCAAATGAAAAGGTGATTCTAGTGGGTCACAGCCTTGGGGGACTCAACATAGCACTTGCCATGGACAAATTCCCAGAAAAAGTTTCCGTTGGTGTTTTTGTAACAGCTTTTGCTCCAGATGTTGAACACCAACCATCTTATGTCTTGGAAAAGTACAGTGAGAGGACTCCGTCTACGGAATGGTTAGACACTGAATTTTCCCCTAGTGGAAACAAAACATCAATGTTCTTTGGTCCCATGTTCTTCTCCAACAAACTCTATCAACTCACCTCCATCCAGGACCTTGAACTGGCCAAGAGTTTAGCAAGGCCATCGTCGCTGTTCTTGGAAGACTTATCCAAGGAAAAGAAGTTCTCGAAAGAGGGTTACGGGTCAGTTCCACGTGCCTACATTGTTTGCACTGAAGACCTTGCTATTCCATTGAATTACCAGCTCTGGATGATCCAAAATGCTGCCTTCAATGATGTTCTGGAGATCAAAGGCACAGATCATATGGTTATGCTTTGCATGCCATCTCAGCTCTTCCATTCTCTCCACCAGATAGCGACTAAATATGCATAA 774 0.4548 MASGSKHFVLVHGACHGAWCWYKLKPLLESAGHRVTVLDLAASGINLQKIEDVDTFSRYSEPLLQLLATIPPNEKVILVGHSLGGLNIALAMDKFPEKVSVGVFVTAFAPDVEHQPSYVLEKYSERTPSTEWLDTEFSPSGNKTSMFFGPMFFSNKLYQLTSIQDLELAKSLARPSSLFLEDLSKEKKFSKEGYGSVPRAYIVCTEDLAIPLNYQLWMIQNAAFNDVLEIKGTDHMVMLCMPSQLFHSLHQIATKYA 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03964 257 Gene3D alpha/beta hydrolase 3 257 IPR029058 -
Spst3g03964 257 SUPERFAMILY alpha/beta-Hydrolases 6 251 IPR029058 -
Spst3g03964 257 Pfam Alpha/beta hydrolase family 8 239 IPR000073 -
Spst3g03964 257 FunFam (S)-hydroxynitrile lyase 3 257 - -
Spst3g03964 257 PANTHER METHYLESTERASE FAMILY MEMBER 5 254 IPR045889 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03964 Spst-Chr3 90061301 90063649 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03964 7 166 Miscellaneous Gene Families AT5G10300 54.268 2.10e-53 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03964 - - gmx:100816222 429.483
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03964 3 90061301 90063649 Spst3g03964 3 90061301 90063649 ECH
Spst3g03965 3 90091796 90100635 Spst3g03964 3 90061301 90063649 PCT
Spst3g03964 3 90061301 90063649 Spst3g03967 3 90107750 90109732 PCT