Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03968 ATGGCATCAGGAAATAAGCATTTTGTTCTGGTGCATGGGGCATGTCATGGAGCTTGGTGTTGGTACAAGCTGAAGCCACTATTGGAATTTGCAGGCCACAGGGTCACAGTGCTGGACCTTGCAGCTTCTGGCATCAACTTGCAGAAGATAGAAGATGTTGATACTTTCTCACAGTATTCGGAGCCTTTGTTGCAGCTATTGGCAACAATTCCCCCAAATGAAAAGGTGATTCTAGTGGGTCACAGCCTTGGGGGACTCAACATAGCACTTGCCCTGGACAAATTCCCAGAAAAAGTTGCCGTTGGTGTTTTCTTAACAGCTGTAACCCCAGACATTGAACACAAGCCATCCTATGTCTTAGAAAAGGATCTAGAATTGGCGAAGAGTTTGTTAAGGCCAGCGTTCCTCTTTGGCGAAGACTTGTCGCAGCTCGAAAACTTCTCCAAACAGGGATATGGATCAGTTCCTCTTGCTTATATCGTTTGCAATGAGGACCTTACGATTTCACTGAGTTTTCAACTCTGGATGATTCAAAATGCTGCCATCAATGACGTTCTAGAGATCAAAGGTGCGGATCATATGCCCATGTTTAGCAAGCCACAAGAACTATGCAATTCTCTGCTGCAAATAGCCGCCAAATACGCATGA 648 0.4522 MASGNKHFVLVHGACHGAWCWYKLKPLLEFAGHRVTVLDLAASGINLQKIEDVDTFSQYSEPLLQLLATIPPNEKVILVGHSLGGLNIALALDKFPEKVAVGVFLTAVTPDIEHKPSYVLEKDLELAKSLLRPAFLFGEDLSQLENFSKQGYGSVPLAYIVCNEDLTISLSFQLWMIQNAAINDVLEIKGADHMPMFSKPQELCNSLLQIAAKYA 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03968 215 FunFam (S)-hydroxynitrile lyase 3 123 - -
Spst3g03968 215 Gene3D alpha/beta hydrolase 3 121 IPR029058 -
Spst3g03968 215 Gene3D alpha/beta hydrolase 122 215 IPR029058 -
Spst3g03968 215 PANTHER METHYLESTERASE FAMILY MEMBER 122 212 IPR045889 -
Spst3g03968 215 Pfam alpha/beta hydrolase fold 7 114 IPR000073 -
Spst3g03968 215 SUPERFAMILY alpha/beta-Hydrolases 5 211 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03968 Spst-Chr3 90122925 90131406 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03968 7 130 Miscellaneous Gene Families AT5G10300 60.484 4.58e-48 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03968 - - gmx:100790419 321.627
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03968 3 90122925 90131406 Spst3g03968 3 90122925 90131406 ECH
Spst3g03967 3 90107750 90109732 Spst3g03968 3 90122925 90131406 PCT