Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03965 ATGAGTTTAGAAATTTTTTCAGATAGCAAGCACTATGTTCTGGTGCACGGGGCTTGTTATGGAGCTTGGCTTTGGTACAAGCTGAAGCCACGCTTGGAATTTGCAGGCCACAAGGTCACAGTGCTGGACCTTGCAGCTTCCGGCACCAACACGCAGAAAATAGAAGATGTTCATACTTTCTCACAGTACTCTGAGCCTTTGTTGCAGTTATTGGCCTCAATTCCCCCAAATGAGAAAGTAGTTCTAGTAGGTCACAGTCTTGGAGGGCTCAATATAGCACTTGCCATGGACAAGTTCCCAGAAAAGGTTGCAGTTGGTGTTTTCGTAGCTGCTGTAATTCCAGACACTGAACACAAACCATCCTATGTCTTGGAACAGTTAATTGAGGTTACATTGGGGATGAATTGGTTGGACACTGTATTCTCCCAGAGTGAAAATAAAACGACAATTACTTTCGGTCCCAAATTTCTGTCCGAAAAGCTCTACCAAGCCTCATCCACTGAAGATGTAGAATTGGCCACGACCTTAGTAAGACCAGGATCCCTCTTTATCGAAGACTTGTCCCAACAGAAAAACTTCTCCATGGAGGGATACGGGTCAGTTCCTCTCGTTTTTATTGTTTCCACTGATGACCATGAAATTCCATTGGGTTTTCAGCTCTGGATGATTAAAAATGCTGGAATCAACGTTGAAGTTGTAGAGATCACAGGCGCAGACCATATGCTTATGATTAGCAAGCCACAAGAACTATGTCGCTCTCTCCTGCATATAGCTACTAAATATGCATGA 789 0.4373 MSLEIFSDSKHYVLVHGACYGAWLWYKLKPRLEFAGHKVTVLDLAASGTNTQKIEDVHTFSQYSEPLLQLLASIPPNEKVVLVGHSLGGLNIALAMDKFPEKVAVGVFVAAVIPDTEHKPSYVLEQLIEVTLGMNWLDTVFSQSENKTTITFGPKFLSEKLYQASSTEDVELATTLVRPGSLFIEDLSQQKNFSMEGYGSVPLVFIVSTDDHEIPLGFQLWMIKNAGINVEVVEITGADHMLMISKPQELCRSLLHIATKYA 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03965 262 Gene3D alpha/beta hydrolase 8 262 IPR029058 -
Spst3g03965 262 PANTHER METHYLESTERASE FAMILY MEMBER 9 259 IPR045889 -
Spst3g03965 262 SUPERFAMILY alpha/beta-Hydrolases 13 257 IPR029058 -
Spst3g03965 262 FunFam (S)-hydroxynitrile lyase 7 262 - -
Spst3g03965 262 Pfam Alpha/beta hydrolase family 13 251 IPR000073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03965 Spst-Chr3 90091796 90100635 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03965 11 168 Miscellaneous Gene Families AT5G10300 50.000 4.70e-51 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03965 - - gmx:100807291 422.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03965 3 90091796 90100635 Spst3g03964 3 90061301 90063649 PCT