Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00444 ATGTCACACACACCAACTGGTGCACATGCATCACATCTCAAAACTGTGATAGCAGCAGTGTATCATTTCCATATCATATATGACAGTCATTTAAGTATGCATCTCATGCCAGATGTAGCCAAAGAAAAGAATGTGGATGTGACTTTCTCAATCAAGTCAGTCACCGCTCAGCAGCTAGGCTCAGGCATCAACGGCTTTAGGTTCATTAGTAATTTTAACAATTATTTTGAGTATCTCTATGGTATCATTTACCCCGGAAGACCAATAGCAAATGTATGCTTCAAAACCTTTGGTTATATAAGCATAGCTCAAGCTGTCTCCTTCCTTAGCGATTTCAAGCTTGGCCACTACACGAAGATATCTCCAAGGTCCATGTTTATGGTACAGGTGGGACCTAGGAGGATCTTTGGTTCTCAGGGAAACTACCAACCACTGAATTGGTTTTTCCTTGGAGGTGCAATAGGGCCAATACTTGTTGGGCTATTGCACAAGACATTCCCGAAGCAGTCATGGATTCCCTTGATCAATCTTCCAGTCCTCCTGGGGGCAGCTGTAATGATGGCACCAACAACAGCACTGAACTACATCGCTTGGATTGTAATTAGAACTATTTTCAACTTCCTTGTCTTCCGTTTCAGGAAGAAATGTTGGCAGAGATACAACTATGTTCTATCAGCAGCACTTTATGCAGGGGTTGCTTTTATGGCTGTTCTGCTCTGCTTCACACTAGAAGTATGCCTTGGTGGGGAACTGATGGGGAGCATTGTCCCCTTGCAACTTGCCCTACAGCTAAGGGCACAGTGGATGATGGTTAAGACACAGATTTGGAAACCAGAAAATGGGCACATTAAAAATGGTAACTTGGAGGATGCAAAGAAAAGATAA 885 0.4305 MSHTPTGAHASHLKTVIAAVYHFHIIYDSHLSMHLMPDVAKEKNVDVTFSIKSVTAQQLGSGINGFRFISNFNNYFEYLYGIIYPGRPIANVCFKTFGYISIAQAVSFLSDFKLGHYTKISPRSMFMVQVGPRRIFGSQGNYQPLNWFFLGGAIGPILVGLLHKTFPKQSWIPLINLPVLLGAAVMMAPTTALNYIAWIVIRTIFNFLVFRFRKKCWQRYNYVLSAALYAGVAFMAVLLCFTLEVCLGGELMGSIVPLQLALQLRAQWMMVKTQIWKPENGHIKNGNLEDAKKR 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00444 294 Pfam OPT oligopeptide transporter protein 141 241 IPR004813 GO:0035673
Spst3g00444 294 Pfam OPT oligopeptide transporter protein 59 130 IPR004813 GO:0035673
Spst3g00444 294 PANTHER ISP4 LIKE PROTEIN 72 130 IPR004648 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00444 Spst-Chr3 7579570 7581346 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g00444 77 245 Organic Solute Cotransporters AT1G09930 48.879 7.82e-60 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00444 - - gmx:100811348 259.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g00444 3 7579570 7581346 Spst6g00621 6 5616730 5623053 PCT
Spst6g00622 6 5626539 5632346 Spst3g00444 3 7579570 7581346 PCT