Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00621 ATGAGGTCTGACTCAGAGAACCCAATCACTAGCGAAGTGGACGAAGACGAGGTGTCTTCCATTGAGGAGGTTCGCCTCACGGTACCCAACACCGACGACCCGACCCAGCCTATATGGACCTTCCGTATGTGGTTCCTGGGTCTGCTCTCCTGCTCCATCCCCCCCTTCGTCATCCAGTCCTTTGCCTACCGTACGGAGTCTCTCATCATCACTCAAATCACCGTTCAGGTTGCTACTCTCCCTATTGGCCACTTTATGGCCGCAGTTCTACCCAAAACTAAGTTCACTCTTCCCGGGTTCGGGTCCAAGTCCTTCTCCTTTAACCCGGGCCCGTTTAACACGAAGGAGCATGTCCTTATCACCATATTCGCCAATGCCGGAAGCGCTTTCGGATCCGGGTCGCCCTATGCTGTTAGTATCGTAACCATTATCAAAGTCTTTTATCGACAAAGAATCTCCCTTTTTCCTGCTTGGCTTCTCATAGTTACTACACAGATGCTAGGTTACGGGTGGGCTGGGATACTGAGGAAGTACGTGGTTGAACCAGCCCATATGTGGTGGCCCAGCACCGTCTCCCAAGTCTCACTTTTCCGAGCAATGCATGAGACAGATGATGACAGAGCAAGAACAAAGTTTTTCTTTTTTGCCCTATTGTGCAGTTTGTTGTGGTATTCGCTCCCTGGATACTTGTTCCAAACGCTCACAAACATCTCATGGGTGTGTTGGATATTCTCCAAGTCAGTTACAGCTCAGCAGATAGGGTCAGGCATGAGGGGCCTTGGAGTTGGAGCCCTCACACTTGACTGGGCTGCCGTGGCATCGTTGATCAGCCCTCTTAACTCACCCTTCTTTGCCATTGTCAATGTTTTTGTGGGCTATGCAGCAATAGTCTATGTTGTGATTCCTATAGCATACTGGGGACTCAATGTCTACAATGCCAATAGGTTTCCCATTTTCTCCTCACACTTGTTTACAGCCCAAGGTCAAAAGTACAACATATCTGCTATTGTAGACAACCATTTCGAGTTAAATGTTGCAGAGTATGAAAAGCAAGGTAGAATTCATCTTAGCCTGTTTTTCGTCCTCAGTTATGGCTTTGGATTCGCCGCCATAGCATCCACCCTCACACATGTCTTCTGCTTCTATGGAAGGGAGATTATGGAGCGCTATCGTGCTTCTTCCAAAAGGAAAGAAGATATTCACACAAAATTGATGAAAAGATACAAAGACATACCTTCCTGGTGGTTTTATTTGTTGCTGGTTGTGACCCTTGTTGTTTCTCTCGCACTGTGCGTCTTTGTAAACGACCAGGTTCAAATGCCCTGGTGGGGTCTTCTCTTTGCTGGAGCCCTAGCTTTCGGATTTACCCTCCCCATTAGCATAATCACTGCCACAACAAACCAGACACCAGGGTTGAATATTATCACTGAGTATGTCTTTGGTCTCATTTACCCGGGAAGACCAATAGCAAATGTATGCTTCAAAACCTATGGTTACATTAGCATGGCCCAGGCTGTCTCTTTCCTCGGTGATTTCAAACTTGGGCACTACATGAAAATCCCTCCAAGATCAATGTTCTTAGTTCAGTTCATAGGTACAATGCTCGCTGGAACCATCAACATTGGGGTAGCATGGTGGTTGCTGAATTCCATCAAGATATGTAATGATGATCTCCTTCCGCCAGACAGTCCCTGGACATGCCCAGTTGACCGTCTATTCTTTGATGCATCAGTTATTTGGGGTCTTGTAGGACCAAAGCGTATGTTTGGTTCTCTAGGAAACTACAGTGCAATGAATTGGTTTTTCCTTGGAGGTGCATTAGGACCCATAATTGTTTGGCTGTTGCACAAAGCATTTCCAAAACAGTCATGGATTCCACTAATCAACCTCCCAGTTCTCCTGGGAGCAACTGGAGCGATGCCACCAGCAACACCATTGAACTACAATGCCTGGATTTTTGTTGGAACAATTTTCAACTTCTTTATCTTCCGTTACAGAAAGAAATGGTGGCAGAGATACAACTATGTTCTGTCTCAAGCACTTGACAGTGGGGTTGCTTTTATGAACCTCTTCATCATCTTCTTATTCGATTTGGAAAACAAGAGCTTAAATTGGTGGGGAAATGATGGTGAACATTGCCCACTCGCATCTTGCCCCACAGCAAAGGGCGTAATCGTTAAAGGTTGCCCTGCAAACTATTGA 2202 0.4623 MRSDSENPITSEVDEDEVSSIEEVRLTVPNTDDPTQPIWTFRMWFLGLLSCSIPPFVIQSFAYRTESLIITQITVQVATLPIGHFMAAVLPKTKFTLPGFGSKSFSFNPGPFNTKEHVLITIFANAGSAFGSGSPYAVSIVTIIKVFYRQRISLFPAWLLIVTTQMLGYGWAGILRKYVVEPAHMWWPSTVSQVSLFRAMHETDDDRARTKFFFFALLCSLLWYSLPGYLFQTLTNISWVCWIFSKSVTAQQIGSGMRGLGVGALTLDWAAVASLISPLNSPFFAIVNVFVGYAAIVYVVIPIAYWGLNVYNANRFPIFSSHLFTAQGQKYNISAIVDNHFELNVAEYEKQGRIHLSLFFVLSYGFGFAAIASTLTHVFCFYGREIMERYRASSKRKEDIHTKLMKRYKDIPSWWFYLLLVVTLVVSLALCVFVNDQVQMPWWGLLFAGALAFGFTLPISIITATTNQTPGLNIITEYVFGLIYPGRPIANVCFKTYGYISMAQAVSFLGDFKLGHYMKIPPRSMFLVQFIGTMLAGTINIGVAWWLLNSIKICNDDLLPPDSPWTCPVDRLFFDASVIWGLVGPKRMFGSLGNYSAMNWFFLGGALGPIIVWLLHKAFPKQSWIPLINLPVLLGATGAMPPATPLNYNAWIFVGTIFNFFIFRYRKKWWQRYNYVLSQALDSGVAFMNLFIIFLFDLENKSLNWWGNDGEHCPLASCPTAKGVIVKGCPANY 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00621 733 PANTHER ISP4 LIKE PROTEIN 12 730 IPR004648 GO:0055085
Spst6g00621 733 NCBIfam small oligopeptide transporter, OPT family 19 700 IPR004648 GO:0055085
Spst6g00621 733 Pfam OPT oligopeptide transporter protein 39 696 IPR004813 GO:0035673
Spst6g00621 733 NCBIfam OPT family oligopeptide transporter 22 696 IPR004813 GO:0035673
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00621 Spst-Chr6 5616730 5623053 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00621 11 732 Organic Solute Cotransporters AT5G64410 75.586 0.0 1150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00621 - - gmx:100786741 1286.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g00444 3 7579570 7581346 Spst6g00621 6 5616730 5623053 PCT