Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00622 ATGTCCTCTGTCTCTGACCCAGAGAAGCTGGTCATGGCCCAAGTAGAAGGCGAAGACGACGACGACGTTTCTCCAATCGAAGAGGTTCGTCTCACGGTCACAAACACCGACGATCCGACCCGACCCGTATGGACTTTCAGGATGTGGTTCCTGGGTCTTCTCTCCTGCTCCCTCCTCTCCTTCCTCAACCAGTTCTTTGCCTACCGTACGGAGCCTCTCATCATCACTCAAATCACCGTTCAGGTTGCTACTCTCCCTATTGGCCACTTCATGGCCGCAGTTCTACCTGAAACCAAGTTCACTCTACCCGGGTTCGGGTCCAAGTCATTCTCCCTCAACCCGGGTCCGTTTAACATGAAAGAGCACGTCCTCATAACGATATTCGCCAATGCTGGAAGCGCTTTCGGAAACGGGTCCCCCTACGCGGTTGGTATCGTTAACATTATCAAAGCCTTTTACGGACGCAACATCTCCTTTCTGGCTTCTTGGCTTCTCATCATTACTACACAGGTGCTAGGATATGGATGGGCCGGACTACTGAGGAAGTACGTGGTGGAACCGGCCCATATGTGGTGGCCCAGCACCCTCGTCCAAGTTTCACTTTTCCGAGCATTGCATGAGAAAGATGACCAACGGCTTTCACGGGCAAAGTTTTTCTTTATTGCACTACTGTGCAGTTTTTCATGGTACGTGATGCCTGGTTACTTCTTCACAACGCTCACAAACATCTCATGGGTATGTTGGATATTCTCCAAGTCAGTTACAGCTCAGCAGATAGGGTCAGGCATGAGGGGCCTTGGAGTTGGAGCCCTCACACTTGACTGGGCTGCCGTGGCATCATTCTTGTTCAGCCCTCTTATCTCACCCTTCTTTGCCATTGTCAATGTTTTTGTGGGCTATGCAGCAATAGTCTATGTTGTGATTCCTATAGCATACTGGGGCCTCAATGTCTACAATGCCAATAGGTTTCCCATTTTCTCCTCACACTTGTTTACAGCCCAAGGTCAAAAGTACAACATATCTGCTATTGTAGACAACCATTTCGAGTTAAATGTTGCAGAGTATGAAAAGCAAGGTAGAATTCATCTTAGCGTGTTTTTCGCCCTCACTTATGGTTTTGGATTTGCCACCGTAGCATCCACCCTAACACATGTGGTCTGCTTCTATGGAAGGGAGATTATGGAGCGCTATCGTGCTTCTTCCAAAAGCAAAGAAGATATTCACACAAAATTGATGAAAAGATACAGAGACATACCTTCCTGGTGGTTTTATTTGTTGCTGGTTGTGACCCTTGTGGTTTCTCTCGCACTGTGCATCTTTCTAAACGACCAGGTTCAAATGCCCTGGTGGGGTCTTCTCTTTGCTGGAGCCCTAGCTTTCGGATTTACCCTCCCCATTAGCATAATCACTGCCACCACAAATCAGCACCTAATAGTTGCGCTGAAATTTAACTTACCTGGAAAGACCACGGATGGTATAGAGCGAGCTCCTAGACGATTCATCACACCAGGGTTGAATATTATCACTGAGTATGTCTTTGGTCTCATTTACCCGGGAAGACCAATAGCAAATGTATGCTTCAAAACCTATGGTTACATTAGCATGGCCCAGGCTGTCTCTTTCCTCGGTGATTTCAAACTTGGGCACTACATGAAAATCCCTCCAAGATCAATGTTCTTAGTTCAGTTCATAGGTACAATGCTCGCTGGAACCATCAACATTGGGGTAGCATGGTGGTTGCTGAATTCCATCAAGAACATATGTAATGATGATCTCCTTCGGCCAGACAGTCCCTGGACATGCCCTGGTGACCGTGTATTCTTTGATGCATCAGTTATTTGGGGTCTTGTAGGACCAAAGCGTATATTTGGTTCTCTAGGAAACTACAGTGCAATGAATTGGTTTTTCCTTGGAGGTGCATTAGGACCCATAATTGTTTGGCTGTTGCACAAAGCATTTCCAAAACAGTCATGGATTCCACTAATCAACCTCCCAGTTCTCCTGGGAGCAACTGGAGCGATGCCACCAGCAACACCATTGAACTACAATGCCTGGATTTTTGTTGGAACAATTTTCAACTTCTTTATCTTCCGTTACAGAAAGAAATGGTGGCAGAGGTACAACTATGTTCTGTCTGCAGCACTTGACAGTGGGGTTGCTTTCATGACCGTCTTACTCTACTTCTCACTTGGTTTGGAAAACAAGAGTCTAAATTGGTGGGGAAATGATGGTGAACATTGCCCACTCGCAGCTTGCCCCACAGCAAAGGGCGTAATCGTTGACGGTTGCCCTGCAAACTGGTGA 2304 0.4688 MSSVSDPEKLVMAQVEGEDDDDVSPIEEVRLTVTNTDDPTRPVWTFRMWFLGLLSCSLLSFLNQFFAYRTEPLIITQITVQVATLPIGHFMAAVLPETKFTLPGFGSKSFSLNPGPFNMKEHVLITIFANAGSAFGNGSPYAVGIVNIIKAFYGRNISFLASWLLIITTQVLGYGWAGLLRKYVVEPAHMWWPSTLVQVSLFRALHEKDDQRLSRAKFFFIALLCSFSWYVMPGYFFTTLTNISWVCWIFSKSVTAQQIGSGMRGLGVGALTLDWAAVASFLFSPLISPFFAIVNVFVGYAAIVYVVIPIAYWGLNVYNANRFPIFSSHLFTAQGQKYNISAIVDNHFELNVAEYEKQGRIHLSVFFALTYGFGFATVASTLTHVVCFYGREIMERYRASSKSKEDIHTKLMKRYRDIPSWWFYLLLVVTLVVSLALCIFLNDQVQMPWWGLLFAGALAFGFTLPISIITATTNQHLIVALKFNLPGKTTDGIERAPRRFITPGLNIITEYVFGLIYPGRPIANVCFKTYGYISMAQAVSFLGDFKLGHYMKIPPRSMFLVQFIGTMLAGTINIGVAWWLLNSIKNICNDDLLRPDSPWTCPGDRVFFDASVIWGLVGPKRIFGSLGNYSAMNWFFLGGALGPIIVWLLHKAFPKQSWIPLINLPVLLGATGAMPPATPLNYNAWIFVGTIFNFFIFRYRKKWWQRYNYVLSAALDSGVAFMTVLLYFSLGLENKSLNWWGNDGEHCPLAACPTAKGVIVDGCPANW 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00622 767 NCBIfam OPT family oligopeptide transporter 27 732 IPR004813 GO:0035673
Spst6g00622 767 Pfam OPT oligopeptide transporter protein 44 729 IPR004813 GO:0035673
Spst6g00622 767 NCBIfam small oligopeptide transporter, OPT family 22 734 IPR004648 GO:0055085
Spst6g00622 767 PANTHER ISP4 LIKE PROTEIN 16 764 IPR004648 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00622 Spst-Chr6 5626539 5632346 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00622 12 766 Organic Solute Cotransporters AT5G64410 78.411 0.0 1244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00622 - - gmx:100811348 1370.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g00622 6 5626539 5632346 Spst6g00622 6 5626539 5632346 ECH
Spst6g00622 6 5626539 5632346 Spst3g00444 3 7579570 7581346 PCT