Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00225 ATGTCGTCTGCTGATGTCGCTCTGAGACCGGTTCTTAAAGAATCGGTGCATTGGCAAGGGCGTTGCTCTGGCGAATCTATCCTAATATATTTGACCGTAGATGGTGCTGTGACGCCAATGCGTGTGTCGGAGTCTGATTCGATTGCTTCGGTGAAAATGAGGATTCAAACATGCAAAGGAATTGCAGGGAAGAAGCACAAGCTGGTGTATGGTGGCAGAGAGCTTGCCCGCAAGGATGCACTCGTTAAGGACTATGGTGTCACTGCTAGCAATGTTCTTCACTTGGTTCTTCGTCTCTCTGACATGATCTTCATTGTTGTAAGGACCACCGCTGGTAAGGAGTTTGAGTTTCAGATTGATCGACATAGAAATGTTGGTTATCTTAAGCAACGGATTAAGAAGAAGGGGAAAGGTTTCATTGATCTTGAGGATGGTCAAGAGCTTTTCTGTGACGGGGAAGAGCTCAAAGACCAGAGCCTCTTCCGTGACTTTTGCAAGGCTGATGATGGTGTGATCCATTTGGTAGTTAAAAAATCAGCTAAGGTTGATGCCAAGCCGGTTCACAAAGATTTGGAGCTTTCGGTTGTTGCCGATGCCTCTGGTGTGGGAGGGAATCAGGTGACGACAAAGATACCACCTAGTGTAGATTTCTGGTTGGAACCAGTTTTTGTGAATCCTAATGTCAATTTTTTTCCTTTCCTCTGGGACATGATTGGCTCCACATTCGATGGTTTGAAACAAGGAAACCACCCTATCAGGTCCACCGAGGGCACAGGTGGGACTTACTTCATGCAAGATTCGGCAGGTATGCAGTATGTTTCGGTTTTCAAGCCCATGGATGAGGAGCCAAATGCGGTTAATAACCCGCAAGGCCTACCGGTTTCATCCAATGGTGAAGGTTTGAAAAGAGGGACTAGGGTTGGAGAAGGAGCTGTGAGAGAAGTTGCAGCATATATATTGGATCATCCAAGGAGTGGGCCAAGATTGGTGTCAGGTGAAGCAATGGGCTTTGCCGGGGTTCCCCCAACTGTTATGGTCCAGTGCTTACACCAAGCCTTCAACCACCCAGATGGGTTTGAGTGCTCCCCAAAGCATTCCAAGGTGGGGTCACTGCATATGTTTATGAAGAATGATGGTAACTGTGAGGACTTAGGGCCAGGGGCTTTTTCTGTGGAGGAGGTGCATAAGATCACTGTGCTTGATTTAAGAATGGCCAATGCAGATAGGCATGCTGGGAATATATTGTTCAGAAAAGATGCAGATGGCCGCACTTCGCTCATTCCCATTGATCATGGCTACTGTCTACCAGAGAAATTTGAGGATTGCACATTTGATTGGCTATACTGGCCCCAAGCACGTCAACCTTACTCTCGTGACACAGTAGCTTATATAAAGTCTCTGGATGCTGAAAGAGATATAGAGCTTCTGAAATATTATGGGTGGGATGTTCCGGTTGAGTGTGCGCGAACACTCCGCATCTCCACAATGTTATTGAAGAAAGGGGTTGACAGAGGTCTCACTCCCTATGCCATTGGAAGTATTATGTGTAGGGAAAATTTGAACAAGGAATCTGTAATCGAGGAGATTATTAGAGAAGCCCAGGAATCATTGGTACCTGGCACGGGGGAATCTGTGTTTCTTGAATCTGTCTCCCAGATCATGGATTCCCACCTTCACAATCTTGCAAGATAG 1692 0.4645 MSSADVALRPVLKESVHWQGRCSGESILIYLTVDGAVTPMRVSESDSIASVKMRIQTCKGIAGKKHKLVYGGRELARKDALVKDYGVTASNVLHLVLRLSDMIFIVVRTTAGKEFEFQIDRHRNVGYLKQRIKKKGKGFIDLEDGQELFCDGEELKDQSLFRDFCKADDGVIHLVVKKSAKVDAKPVHKDLELSVVADASGVGGNQVTTKIPPSVDFWLEPVFVNPNVNFFPFLWDMIGSTFDGLKQGNHPIRSTEGTGGTYFMQDSAGMQYVSVFKPMDEEPNAVNNPQGLPVSSNGEGLKRGTRVGEGAVREVAAYILDHPRSGPRLVSGEAMGFAGVPPTVMVQCLHQAFNHPDGFECSPKHSKVGSLHMFMKNDGNCEDLGPGAFSVEEVHKITVLDLRMANADRHAGNILFRKDADGRTSLIPIDHGYCLPEKFEDCTFDWLYWPQARQPYSRDTVAYIKSLDAERDIELLKYYGWDVPVECARTLRISTMLLKKGVDRGLTPYAIGSIMCRENLNKESVIEEIIREAQESLVPGTGESVFLESVSQIMDSHLHNLAR 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00225 563 CDD Ubl_ubiquitin_like 105 175 - -
Spst2g00225 563 ProSiteProfiles Ubiquitin domain profile. 103 181 IPR000626 GO:0005515
Spst2g00225 563 SUPERFAMILY Ubiquitin-like 31 100 IPR029071 -
Spst2g00225 563 SUPERFAMILY Protein kinase-like (PK-like) 404 561 IPR011009 -
Spst2g00225 563 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 248 545 IPR000403 -
Spst2g00225 563 ProSiteProfiles Ubiquitin domain profile. 29 102 IPR000626 GO:0005515
Spst2g00225 563 Pfam Ubiquitin family 33 99 IPR000626 GO:0005515
Spst2g00225 563 Pfam Ubiquitin family 105 178 IPR000626 GO:0005515
Spst2g00225 563 Pfam Phosphatidylinositol 3- and 4-kinase 257 510 IPR000403 -
Spst2g00225 563 Gene3D - 103 178 - -
Spst2g00225 563 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 37 536 IPR044571 -
Spst2g00225 563 SMART ubq_7 103 177 IPR000626 GO:0005515
Spst2g00225 563 SMART ubq_7 27 98 IPR000626 GO:0005515
Spst2g00225 563 Gene3D - 26 102 - -
Spst2g00225 563 SUPERFAMILY Ubiquitin-like 84 178 IPR029071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00225 Spst-Chr2 1709240 1711194 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00225 1 562 Acyl Lipid Metabolism Gene Families AT5G24240 56.348 0.0 656
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00225 - - gmx:100787492 978.393
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g00225 2 1709240 1711194 Spst2g00225 2 1709240 1711194 ECH
Spst2g00225 2 1709240 1711194 Spst4g01973 4 60389969 60392398 ECH
Spst2g00225 2 1709240 1711194 Spst3g00998 3 13393039 13395379 PCT