Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02854 ATGCAGCGTCAACGCCATATTTCGATCGCAATTTCACTGATATCCATCTTGTTTTATTCCGCATTAACTAGAGCTCTTCCTGCACCTGAGTTTGGTTACAATAAAGATAGTGGAAATGGGCCCGAACACTGGGGTGATATTAAGGAAGAATGGGCAGCCTGTAAAATAGGGCAAATACAGTCTCCTATTGATTTGTCCAGTAAAAGTGTGCAAGTGATCCCCATGTTAGAGGGGCTCAAGTACTGGACTTATAACCCTCAACATGCTACTGTCTTGAACATCGGTAATGTTATTGCAGTGGTGTGGAAAGGGGATGCAGGCTCAATTGACATAGATGGAACACGTTTCCCCCTCGTACAAGCCCATTGGCACTGGCCCTCCGAACATACCATCAATGGCCGGAGGTATGACTTGGAGTTGCACATGCTTCATGTTAGCCCGCAACCTGATGGAACAAACAAGACAGCTGTTGTTGGTATTTTGTACAAGTACGGTTCCCCTGATCCATTGCTCTCTAAGTTGGGAGAATACATAACGGACATTCCTGAAAAGAACCAAGAGAAAAGCGTAGGGGTGATTGATCCCTCAGAATTCATAAAAGGTAGCAAGATGTACTACAGATACAAGGGATCACTCACTACACCTCCCTGCACTGAAGGCGTCATTTGGACCGTTCATAATAAGATAAGAACTGTTTCAAAAGAACAAGTGAAGTTACTGGAGGATACGTATGCTAAAAGGAATGCAAGGCCACTGCAGCCCCAAAATGAGAGAGAGATACAACTCTACGTCTCAAAGCCAAAGAATAAGCCTCAGCATTAG 822 0.444 MQRQRHISIAISLISILFYSALTRALPAPEFGYNKDSGNGPEHWGDIKEEWAACKIGQIQSPIDLSSKSVQVIPMLEGLKYWTYNPQHATVLNIGNVIAVVWKGDAGSIDIDGTRFPLVQAHWHWPSEHTINGRRYDLELHMLHVSPQPDGTNKTAVVGILYKYGSPDPLLSKLGEYITDIPEKNQEKSVGVIDPSEFIKGSKMYYRYKGSLTTPPCTEGVIWTVHNKIRTVSKEQVKLLEDTYAKRNARPLQPQNEREIQLYVSKPKNKPQH 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02854 273 CDD alpha_CA_prokaryotic_like 40 262 IPR041891 -
Spst1g02854 273 PANTHER CARBONIC ANHYDRASE 30 258 IPR023561 GO:0004089|GO:0008270
Spst1g02854 273 Gene3D Alpha carbonic anhydrase 28 270 IPR036398 -
Spst1g02854 273 MobiDBLite consensus disorder prediction 254 273 - -
Spst1g02854 273 ProSiteProfiles Alpha-carbonic anhydrases profile. 29 264 IPR001148 -
Spst1g02854 273 ProSitePatterns Alpha-carbonic anhydrases signature. 127 143 IPR018338 GO:0004089|GO:0008270
Spst1g02854 273 MobiDBLite consensus disorder prediction 250 273 - -
Spst1g02854 273 Pfam Eukaryotic-type carbonic anhydrase 39 261 IPR001148 -
Spst1g02854 273 SUPERFAMILY Carbonic anhydrase 30 260 IPR036398 -
Spst1g02854 273 SMART Carb_anhydrase_2a 31 264 IPR001148 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02854 Spst-Chr1 37139271 37145747 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02854 K01674 - gmx:100799362 432.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02854 1 37139271 37145747 Spst7g01013 7 17898748 17901458 PCT
Spst7g01012 7 17896098 17897774 Spst1g02854 1 37139271 37145747 PCT