Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g01013 ATGAATCATCAAATCAGGTGTAGAGTTTTTCTTCCGAATGTCATAATACTTGCAATCATCCTACTCCATTCAACAAGATGGATCAGTGCACAGGAAGTTGAGGATGAGAGTGAGTTTGATTACATAAAAGGGAGTGAGAAGGGTCCTTCACACTGGGGGGAACTGAAGAAGGAATGGGAAACATGTAAAAGTGGGAAAATGCAGTCTCCAATTGATTTGTCAAGCCACAGGGTGAGAGTGGTGCCAAAGTTGGGGGAGCTGAAGAAGCACTATAAGCCCCAGAATGCCACTGTCAAGAACAGAGGCCATGATATTGAGTTGAAATGGGAGAAAGATGCTGGATCAATGAACATCAACGGCACCGAATTTTTTCTGCATCAATGCCATTGGCACTCTCCTTCAGAACATACCATCAATGGAAGGAGGTATGACTTGGAGCTCCACATGGTTCATGAAAGTAAAAGAAAAAATGGAAGAAGCATGATTGCTGTTGTTGGAGTTCTGTTCAAGATTGGTCGACCCGATCCCATTCTCAACAAGTTGTCAAAAATCATAAAAAGCATGGTGGATGAAGCAGCAGAAGAGAAAATTGGGGTGTTTGATCCGTCAGAAATTAAGCTGGGTGGGAAGAAGTACTACAGATACATTGGCTCCCTCACTGTTCCTCCTTGCACTGAAGGTGTCATTTGGACTATCAATAAAAAGATAAGAAGTGTGTCGAGGGCACAGGTGGAATTACTGAGAGAGGCTGTCCACGATCATGCAGAGAAGAATTCCAGACCTATACAAGCCCTGAATAGACGAGGGATACAACTCTATGGACCAAGACGCAAGGAATAA 840 0.4345 MNHQIRCRVFLPNVIILAIILLHSTRWISAQEVEDESEFDYIKGSEKGPSHWGELKKEWETCKSGKMQSPIDLSSHRVRVVPKLGELKKHYKPQNATVKNRGHDIELKWEKDAGSMNINGTEFFLHQCHWHSPSEHTINGRRYDLELHMVHESKRKNGRSMIAVVGVLFKIGRPDPILNKLSKIIKSMVDEAAEEKIGVFDPSEIKLGGKKYYRYIGSLTVPPCTEGVIWTINKKIRSVSRAQVELLREAVHDHAEKNSRPIQALNRRGIQLYGPRRKE 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g01013 279 SMART Carb_anhydrase_2a 41 274 IPR001148 -
Spst7g01013 279 ProSiteProfiles Alpha-carbonic anhydrases profile. 37 274 IPR001148 -
Spst7g01013 279 PANTHER CARBONIC ANHYDRASE 36 268 IPR023561 GO:0004089|GO:0008270
Spst7g01013 279 SUPERFAMILY Carbonic anhydrase 38 270 IPR036398 -
Spst7g01013 279 Pfam Eukaryotic-type carbonic anhydrase 48 271 IPR001148 -
Spst7g01013 279 Gene3D Alpha carbonic anhydrase 35 277 IPR036398 -
Spst7g01013 279 CDD alpha_CA_prokaryotic_like 48 272 IPR041891 -
Spst7g01013 279 ProSitePatterns Alpha-carbonic anhydrases signature. 134 150 IPR018338 GO:0004089|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g01013 Spst-Chr7 17898748 17901458 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g01013 K01674 - gmx:100797935 499.204
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02854 1 37139271 37145747 Spst7g01013 7 17898748 17901458 PCT