Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g01012 ATGGAAGAAGTTGTGGACGAAAGGGAGTTTGATTACATGAGAGGAAGTAAAAAGGGACCTGATCACTGGGGAGAGATAAAGAAAGAATGGTCAGCATGTAAACATGGAGACATGCAATCTCCCATAGACTTGTCATGTGCCAGAGTCAAAATTATCCCTCGCTGTCAACAACTCCACACTGATTACTTTTCTTCTAATGCCACCATGATCAACAGAGGCCATGATATTGCTGTATATTGGAAGGGTGATGCTGGCTCAATACACATCAATGGAACCGAATTCTTTCTGAAACAATGTCATTGGCACTCTCCTTCTGAACATTCCATCAATGGCAGGAAGTATGACTTGGAGATGCACATGGTGCATGCAAGTGGGGAAAACAAGATTTGTGTGGTTGGTGCTTTCTATAAGATTGGTCATCGCCCTGATCGTTTTCTCTCTCGGGTGGAGAAAGATATGAAGCAGCTGGTTGATGAAGAAGTAGAGAGAGAAATTGGAGAGACAAATCCCTCAGGAATACAGACAAGAGGCAATATGTATTACAGATACTTAGGCTCACTCACCACTCCTCCTTGCACTGAAGGTGTCATCTGGAACATTGATAGAAAGATAAGGACAGTTTCGGAAGCACAAGTGAGGCTTCTGAGGGAGGCAGTGCATGATCATGCAGAGAGGAATTCCAGACCAAGGCAGCCACGTAACCAAAGAGATATATTATACTTCCGATTCAAAAGCAGAGCAAATCAAAAAAATAAATTCTGA 762 0.4278 MEEVVDEREFDYMRGSKKGPDHWGEIKKEWSACKHGDMQSPIDLSCARVKIIPRCQQLHTDYFSSNATMINRGHDIAVYWKGDAGSIHINGTEFFLKQCHWHSPSEHSINGRKYDLEMHMVHASGENKICVVGAFYKIGHRPDRFLSRVEKDMKQLVDEEVEREIGETNPSGIQTRGNMYYRYLGSLTTPPCTEGVIWNIDRKIRTVSEAQVRLLREAVHDHAERNSRPRQPRNQRDILYFRFKSRANQKNKF 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g01012 253 PANTHER CARBONIC ANHYDRASE 7 236 IPR023561 GO:0004089|GO:0008270
Spst7g01012 253 SUPERFAMILY Carbonic anhydrase 10 240 IPR036398 -
Spst7g01012 253 ProSiteProfiles Alpha-carbonic anhydrases profile. 8 242 IPR001148 -
Spst7g01012 253 ProSitePatterns Alpha-carbonic anhydrases signature. 105 121 IPR018338 GO:0004089|GO:0008270
Spst7g01012 253 Pfam Eukaryotic-type carbonic anhydrase 19 240 IPR001148 -
Spst7g01012 253 SMART Carb_anhydrase_2a 12 242 IPR001148 -
Spst7g01012 253 CDD alpha_CA_prokaryotic_like 19 240 IPR041891 -
Spst7g01012 253 Gene3D Alpha carbonic anhydrase 6 249 IPR036398 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g01012 Spst-Chr7 17896098 17897774 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g01012 K01674 - gmx:100784540 417.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst7g01012 7 17896098 17897774 Spst7g01012 7 17896098 17897774 ECH
Spst7g01012 7 17896098 17897774 Spst1g02854 1 37139271 37145747 PCT