Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02764 ATGCAGAGTGAGCAACAGAGCAACAACAACAACCAGTTGGTAGTGCAGAATTCAGGGAGCCTCAGCTTCAGCAGCCATTTGTCCAAGGAAGATGAAGAGATGTCCAGGTCTGCTCTCTCCACCTTCAGGGCCAAGGAGGAAGAGATTGAAAGGAAGAAGATGGAGGTTAGAGAAAAGGTTCAGCTTCAGTTAGGTCGTGTTGAGGAAGAAACCAAGCGTCTTGCCACCATTCGTGAGGAGCTTGAAGCCTTGGCAGATCCAATGAGGAAAGAAGTTGCTCTTGTTCGGAAAAAGATTGATTCCGTAAACAAAGAATTAAAGCCACTGGGTCATGCCTGCCAGAAGAAGGAGAAAGAATACAAAGACGCCCTTGAAGCTTTTAATGACAAGAACAGGGAAAAAGTACAGCTAATCACCAAGTTGATGGAGTTGGTGAGTGAAAGTGAAAGATTGAGGATGAAGAAGCTGGAGGAGCTGA 478 0.4582 MQSEQQSNNNNQLVVQNSGSLSFSSHLSKEDEEMSRSALSTFRAKEEEIERKKMEVREKVQLQLGRVEEETKRLATIREELEALADPMRKEVALVRKKIDSVNKELKPLGHACQKKEKEYKDALEAFNDKNREKVQLITKLMELVSESERLRMKKLEEL 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02764 159 MobiDBLite consensus disorder prediction 1 42 - -
Spst1g02764 159 Coils Coil 113 133 - -
Spst1g02764 159 PANTHER RAB6-INTERACTING PROTEIN GORAB 4 159 IPR007033 -
Spst1g02764 159 Coils Coil 39 59 - -
Spst1g02764 159 Pfam Transcriptional activator 16 159 IPR007033 -
Spst1g02764 159 MobiDBLite consensus disorder prediction 26 42 - -
Spst1g02764 159 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02764 Spst-Chr1 36123900 36125384 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02764 - - gmx:100499923 273.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02764 1 36123900 36125384 Spst10g00590 10 5968664 5973593 ECH
Spst1g02764 1 36123900 36125384 Spst1g02764 1 36123900 36125384 ECH
Spst1g02764 1 36123900 36125384 Spst11g01226 11 36632509 36634192 ECH