Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00590 ATGAATGAGGAGAGATTTGTTCCTATTGGCAAACCTTTTGGGGGAAAGCACGAATTTGGATCGACCCAGAGAGAAGATAAAGAGTCATTGCGAGAGTTTGAGTGGGAACGAGAAGAGGGTGTGATGCTTTCAATTCATGGTTTTCAGTTTGTCCTTGCTCGCCCTGGTTATGGTCAAAGCCTGAAATCGATAATTGACATGCTCTTCGTATTCAGGCACAATAATTGGACCAAGTTTGTGGTGAAGCACATGGGCCTAGTTTGCAGCAGCAGAGAGGAAATGCAGAAAATGAAGAACCTTGGTAGCATTGGAAGCAGTGGGAGGCTATCAGCAGAAGAGTATGAGGATGAGGAGATTTCAAAGCTGGCCATCTCCACGTTTCAATCTAAGGAAGAAGAAATTGAGAGGAAAAAAGTGGAGGTGAGAGAGAAAGTTGAACTCCAACTTGGTCGTGCTGAAGAAGAGACTAGGCGCTTGGCACACATTTGGGAAGAGCTTGAAGTGCTTGATGATCCCATGAGGAAGGAAGTTGCAATGGTACGCAAGAAGATTGACTTGGCTAACAGAGATTTAAAGTCACTGGGACTTAACTACCAGAAAAAGGAGAAAGAGTATAAAGAATCCTTGGAAGCTTTCAACGAAAAGAACAAAGAAAAGGCTCATTTAGTAACCACACTAGTTGAGATGTTAACTGAGAGTGAAAGAATGAGGATGAAGAAACTGGAAGAGCTATGCAAAATCATAGAGTCTCTGTCTCTGAAACCATAA 768 0.4271 MNEERFVPIGKPFGGKHEFGSTQREDKESLREFEWEREEGVMLSIHGFQFVLARPGYGQSLKSIIDMLFVFRHNNWTKFVVKHMGLVCSSREEMQKMKNLGSIGSSGRLSAEEYEDEEISKLAISTFQSKEEEIERKKVEVREKVELQLGRAEEETRRLAHIWEELEVLDDPMRKEVAMVRKKIDLANRDLKSLGLNYQKKEKEYKESLEAFNEKNKEKAHLVTTLVEMLTESERMRMKKLEELCKIIESLSLKP 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00590 255 PANTHER RAB6-INTERACTING PROTEIN GORAB 91 250 IPR007033 -
Spst10g00590 255 Pfam Transcriptional activator 98 250 IPR007033 -
Spst10g00590 255 Coils Coil 184 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00590 Spst-Chr10 5968664 5973593 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00590 - - gmx:100794044 295.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02764 1 36123900 36125384 Spst10g00590 10 5968664 5973593 ECH
Spst10g00590 10 5968664 5973593 Spst10g00590 10 5968664 5973593 ECH