Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01226 ATGGCAACACCGAAACAGCCTTATGAGCAACACCAACAACAACCAAATGTGCAGCGTGTGAGAAACTCGGGGATGATTAACGTCAACCAGAGTCCAATGAGGGATGACAAGGAGGAGGAGATGTCAAGATCAGCTTTGGCAATGTTCAGAGCAAAAGAAGAAGAAATTGAGAGGAAAAAAATGGAGGTGAGGGATAAGGTTCATGCTTACCTGGGTCGAGTAGAGGAGGAAACAAAACGCTTGGCTGAGATTAGAGAAGAGCTTGAGGGTCTCACAGATCCATTGAGGAAGGAGGTTGCAATGGTTCGAAAGAAAATAGACAGTGTGAACAAAGAGTTAAAGCCACTGGGCCAAACCTGCCAAAGAAAGGAAAGAGAATATAAGGAAGCCCTTGATTCTTTCAATGAGAAAAACAAGGAAAAAGCTCAACTTGTTACTAAGCTAATGGAGCTGGTGACTGAAAGTGAGAAGTTGAGGATGAAGAAGCTGGAGGAGTTAAGCAAAAACGTAGATACACTGAACTGA 525 0.4343 MATPKQPYEQHQQQPNVQRVRNSGMINVNQSPMRDDKEEEMSRSALAMFRAKEEEIERKKMEVRDKVHAYLGRVEEETKRLAEIREELEGLTDPLRKEVAMVRKKIDSVNKELKPLGQTCQRKEREYKEALDSFNEKNKEKAQLVTKLMELVTESEKLRMKKLEELSKNVDTLN 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01226 174 Coils Coil 67 87 - -
Spst11g01226 174 Pfam Transcriptional activator 21 172 IPR007033 -
Spst11g01226 174 Coils Coil 120 140 - -
Spst11g01226 174 MobiDBLite consensus disorder prediction 1 41 - -
Spst11g01226 174 PANTHER RAB6-INTERACTING PROTEIN GORAB 6 171 IPR007033 -
Spst11g01226 174 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01226 Spst-Chr11 36632509 36634192 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01226 - - gmx:100499699 318.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g01226 11 36632509 36634192 Spst11g01226 11 36632509 36634192 ECH
Spst1g02764 1 36123900 36125384 Spst11g01226 11 36632509 36634192 ECH