Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00959 ATGACAGCTATGGATCGCACTGAGAGGGATATAGAGCTTCTTCTCATAGAGCTAAAGCCACAAATTGTTTTCTTTGACTTCACATATTGGCTACCCAACATGACTCGTCGCTTGGGGATCAAATCTTTTCATTACTTGATCGTCAGTCCTGCGACAGTATCGTACTGTGCATCCCCTCCAAGGATGAACCACAGTGGTAGCTTAACTGAAATTGACCTTATGAAACCCCCTCTTGGTTACCCTATATCATCCATCAAACTCCATGCACATGAAGCAAAGTTCCTTGCTTCGAAGAGGAACTGGGAGTTTGGTAGTGGTGTTCTCTTTTATGACCGCCTCTATAGTGGTCTAACCCAGTCAGATGCAATTGGATTCAAAGGTTGCAGTGAAATTGAGGGACCTTTTGTTGATTACATTGAGGAGCAATTTGGGAAGCCTGTTCTCCTTTCTGGACCTATCATACTCGAGCGACCCAACGCTGTTTTAGAGGAAAAATGGAGTGCATGGCTTGGAAGCTTCAAGGATGGTTCTGTGATTTTTTGTGCACTAGGGAGTGAATGGAAATTAACTCATGGTCAGTTCAAAGAATTGTTGTTGGGTCTTGAGCTTACAAGGCTTCCATTTTTGGTTGTTCTGAAAATTCCTATTGGGTTTGAGACAATGGAAGATGCTCTCCCAGAAGGGTTTAAGGAAAGGGTTGAAGGGAGAGGAATTGTCCACAGTGGATGGATACAACAACAGTTGATTTTGGAACACCCATCAGTGGGTTGCTTCATAACACACTGTGGTGCTGGGTCATTGACCGAGGCACTGGTAAATAAGTGTCAAATGGTGTTACTGCCTCAATTAGATGGTGATCATATCATTAGTGCAAGGACGATGGGTGGAAATTTGAAGGTTGGGGTTGAAGTGGAGAAGGGTGAAGAAGATGGTTGGTTCACAAAGGAGAGTGTAAGCAAAGCAGTGAAAATGGTGATGGATGAGGATAATGAAGTTGGCAGAGAAGTGAGGGCAAATCATGCAAAATTGAGGAATTTCTTGGTAAGCCCTGATTTAGAATCAATCTGTGTTGATACCTTCTGTGAGAAGCTTCAAGATTTACTCATGTGA 1110 0.4315 MTAMDRTERDIELLLIELKPQIVFFDFTYWLPNMTRRLGIKSFHYLIVSPATVSYCASPPRMNHSGSLTEIDLMKPPLGYPISSIKLHAHEAKFLASKRNWEFGSGVLFYDRLYSGLTQSDAIGFKGCSEIEGPFVDYIEEQFGKPVLLSGPIILERPNAVLEEKWSAWLGSFKDGSVIFCALGSEWKLTHGQFKELLLGLELTRLPFLVVLKIPIGFETMEDALPEGFKERVEGRGIVHSGWIQQQLILEHPSVGCFITHCGAGSLTEALVNKCQMVLLPQLDGDHIISARTMGGNLKVGVEVEKGEEDGWFTKESVSKAVKMVMDEDNEVGREVRANHAKLRNFLVSPDLESICVDTFCEKLQDLLM 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00959 369 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 242 329 IPR002213 GO:0008194
Spst5g00959 369 CDD GT1_Gtf-like 1 344 IPR002213 GO:0008194
Spst5g00959 369 PANTHER GLYCOSYLTRANSFERASE 3 348 - -
Spst5g00959 369 Gene3D Glycogen Phosphorylase B; 1 167 - -
Spst5g00959 369 Gene3D Glycogen Phosphorylase B; 168 347 - -
Spst5g00959 369 FunFam Glycosyltransferase 165 349 - -
Spst5g00959 369 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 18 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00959 Spst-Chr5 9038828 9039937 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g00959 2 368 Glycosyltransferase AT5G54010 46.739 1.25e-111 332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00959 K22794 - gmx:100808470 623.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00959 5 9038828 9039937 Spst11g00810 11 32122195 32126122 PCT