Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11697 ATGGACAAGTGGGATAATAAACCCTCAAGAGATCATAGGAAACAACACCACAGAGAAAACCCTTCTTTCTCTTCCACTCTTCTTGATGTAATTTACCGTTCCATCGACGAAGGACAAACAGAGGAGAAAGAAGACCAACTCATATTCTACAGAGAAACCATGAGGAAGCAGAAACAGAACACCCTGTTCAGAGAAGAGGTTGGTGAAGGTGAAAAGCTCAACCTTAGAAGATCCAGAAAGGTGGAGAATTGGATGGAAAGGAGGCCTAGTGAGAAAGTTGTAATGGGAAGGAATTCGTTGACAGAATTTGAAAGAAGAACACGAAGCAATTCCAATACACTTTCTATGTATTCAAGCTCATCTTCCTCTGAGTCAAGTTCTGCTGGTGGGTTTTCTTCATCAGAGTCAGAGTCTTTCTATGGAGTTCATAGGCCAAAGCCAATTCGAACAAGTGTTTCTGAAAAAACCAACCTTGATGCTCTTCATGGTTTCAGGAACCACTCTGCTCAGACCCAAAAGCCAAAGCATGAGAATGGCTTTGGGAAAACAAAGTCCAAAGCTTTAAGGATTTTATATGGTGACTTGAAAAAAGCAAAACAACCCATTTCACCAGGTGCTAGACTTGCTAGCTTTCTGAATTCTCTTTTCACTTCTGGTGGAAATGCAAAAAAAGCAAAGGTTTCTTCAACAACTTCTGTTGTGGCTAATAGGCATGAGTCCAAATCAGCACAAGCTTCTTCTACTTGTTCATCAGCATCTTCTTTTTCAAGGTCTTGTTTGAGCAAAACCCCTTCATCAAGATCAGGTGCAAAAAGGTCTGTGAGGTTTTGCCCTGTTAGTGTAATAGTGGATGAAGATTGCAGGCCTTGTGGGCACAAGAATCTGCATGAAGGTGAAGAGGGGTTAGTGGCTACACTGGCTGCTACCTCTGCCATGCAGAAAAACTATGGAAAAAGCAACAGCAACGAGGAGCTGAGGTTGCATGTGATGCAAGAGAGTCGAAGGGTGGAGGAGTTAGCTAGAGACTTGTTAAAGAATTATCAGAAAAAGAATGAAGTGGACTTTGATATGCAGTTTGAAGAAGAAGAAGAAGATGATGATGATGCAGCTAGTTGTTCAAGTTCTGATCTTTTTGAATTGGATAATCTATCAGCAATTGGGATTGAGAGGTATAGGGAAGAATTGCCTGTGTATGAAACTACCCATTTCACTACCAATAGAGCCATTGCGAATGGCTTCATTCTGTAA 1248 0.4135 MDKWDNKPSRDHRKQHHRENPSFSSTLLDVIYRSIDEGQTEEKEDQLIFYRETMRKQKQNTLFREEVGEGEKLNLRRSRKVENWMERRPSEKVVMGRNSLTEFERRTRSNSNTLSMYSSSSSSESSSAGGFSSSESESFYGVHRPKPIRTSVSEKTNLDALHGFRNHSAQTQKPKHENGFGKTKSKALRILYGDLKKAKQPISPGARLASFLNSLFTSGGNAKKAKVSSTTSVVANRHESKSAQASSTCSSASSFSRSCLSKTPSSRSGAKRSVRFCPVSVIVDEDCRPCGHKNLHEGEEGLVATLAATSAMQKNYGKSNSNEELRLHVMQESRRVEELARDLLKNYQKKNEVDFDMQFEEEEEDDDDAASCSSSDLFELDNLSAIGIERYREELPVYETTHFTTNRAIANGFIL. 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11697 415 MobiDBLite consensus disorder prediction 95 151 - -
Seca4g11697 415 MobiDBLite consensus disorder prediction 1 26 - -
Seca4g11697 415 MobiDBLite consensus disorder prediction 105 139 - -
Seca4g11697 415 Coils Coil 322 342 - -
Seca4g11697 415 PANTHER PROTEIN BIG GRAIN 1-LIKE A-RELATED 7 415 IPR039621 GO:0009734
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11697 Seca-Chr4 257101319 257102566 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11697 - - gmx:100798956 550.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g00655 12 5898399 5899568 Seca4g11697 4 257101319 257102566 ECH
Seca4g01187 4 18976106 18977299 Seca4g11697 4 257101319 257102566 ECH
Seca4g11697 4 257101319 257102566 Seca4g11697 4 257101319 257102566 ECH
Seca4g11697 4 257101319 257102566 Seca4g01187 4 18976106 18977299 ECH