Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01187 ATGGACAGGTTACACTCTAAAAACCCCTCTTTCTCTACCACACTTCTCGACAAAATTTACCGTTCCATCGACGAAGGAGACACAAAGGGTCCCGATATGAAGTTCTACACAGAAGAACAAGAACAAGAGTTAACAAACGCAAACGCAAACGCGAGTCTTCGTCGTATGACACAAATGGAGAGAAAATCGCGTTATGATCATGTTCATGTTCATGACCAGGATGCTCTGTTTTTTAGCTCAACTTCAAGTTCTTCTGATTCTAGCTCTGGTTTGTTATCATCCTCTGACACGGAATCGATGTACGGAGTGAGATCACGAGTTTCTTCGTGTTTCGCTCCATCGAGGCCTAAACCTGTTAGGACCAGCGTGTCAGAGAAGAAGAAGCATGAAGAGAGACACATTGATGATGAAGAGGGTTTGATCAAGTCAAAATCAAGGGCTTTGAAGATTTACAATAATCTGAAGAAGGTGAAGCAACCCATCTCTCCAGGAGGGAAATTAACCAATTTTCTAAACTCTCTGTTCACAACGAAAACCAAAACTACCACACCCTCTTACGAAGATGTGAACGCTGAGAGAAAAGCTAAGTCAGGACAAGCCTCAACTTGTTCTTCAGCATCCTCGTTCTCAAGGTCTTGTTTGAGCAAGACTTCACCTTCTTCTAGAGAAAAGTTGCGCAATGGGGTTAAAAGGACAGTGAGGTTTTACCCTGTGAGCGTGATTGTGGATGAAGATAGTCGACCCTGTGGGCACAAGTGCTTGTATGAAGGAGAAGATAGAAGCCTTATGGCTGTGTCTGTGCCAACTGCGTGGAAAATTGGACGGTCACCTACGAAGAAGAAGAATGAAGAAGAGGTAATGGATAAGAGTAAGCGAGTGGAGGAGGCTGCTAGAGAGTTCTTAAAAGAGTACCATCGCAACCAGAAGAAGAGTAGTGATTTGATTTTGAGAGATTTTCCTATAAGGAAAAACTTGGATGAGGAAGATGAAGAGGATGATGATGATGCAGCAAGCTATTCAAGTTCGGATCTTTTTGAGCTTGATCACCTAGCGGTGATTGGGAATAATAGGTACTGTGAGGAACTGCCAGTGTATGAGACTACTCATGTTAGTACTAATCGTGCCATTGCTAATGGCCTCATAATGTAA 1149 0.4299 MDRLHSKNPSFSTTLLDKIYRSIDEGDTKGPDMKFYTEEQEQELTNANANASLRRMTQMERKSRYDHVHVHDQDALFFSSTSSSSDSSSGLLSSSDTESMYGVRSRVSSCFAPSRPKPVRTSVSEKKKHEERHIDDEEGLIKSKSRALKIYNNLKKVKQPISPGGKLTNFLNSLFTTKTKTTTPSYEDVNAERKAKSGQASTCSSASSFSRSCLSKTSPSSREKLRNGVKRTVRFYPVSVIVDEDSRPCGHKCLYEGEDRSLMAVSVPTAWKIGRSPTKKKNEEEVMDKSKRVEEAAREFLKEYHRNQKKSSDLILRDFPIRKNLDEEDEEDDDDAASYSSSDLFELDHLAVIGNNRYCEELPVYETTHVSTNRAIANGLIM. 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01187 382 MobiDBLite consensus disorder prediction 109 135 - -
Seca4g01187 382 MobiDBLite consensus disorder prediction 195 222 - -
Seca4g01187 382 MobiDBLite consensus disorder prediction 120 135 - -
Seca4g01187 382 PANTHER PROTEIN BIG GRAIN 1-LIKE A-RELATED 5 382 IPR039621 GO:0009734
Seca4g01187 382 MobiDBLite consensus disorder prediction 188 225 - -
Seca4g01187 382 MobiDBLite consensus disorder prediction 79 98 - -
Seca4g01187 382 Coils Coil 279 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01187 Seca-Chr4 18976106 18977299 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g01187 - - pcin:129318692 410.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g01187 4 18976106 18977299 Seca4g01187 4 18976106 18977299 ECH
Seca4g01187 4 18976106 18977299 Seca4g11697 4 257101319 257102566 ECH
Seca12g00655 12 5898399 5899568 Seca4g01187 4 18976106 18977299 ECH
Seca4g11697 4 257101319 257102566 Seca4g01187 4 18976106 18977299 ECH