Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g00655 ATGCACCGGAGGGAGAGATCCATGCGAGAAGGCTCATACCCACAAAGGAGAAGAACCCCTTCTTTCTCCTCCACTCTTCTCGACGCCATTTACCGTTCCATTGACGAATCAAAAACCGATCTTGATGAGGATCAACAACAGAGTCTTTGCCATAATCAAACCACCCACACAAAACAGAACCATGATGTTCACTCTGAAAAAGGTGGCAGAGAAAGGATGAATCTTCGCAGAGCTGTGATGTTAGAAGATTGGATGGAGAAACAAAGCTCTCAAAGTTCTCAACTCCTGAACTCAAGTTCAAGTTCCTCAGAATGTAGCTCTGGGGGAATTTTTTCATCCTCAGAAACAGAGACAACCTGCAAGAAACAGAGATCAAGACCCAAATGTGAAAGGTCCCAGAAGCATGATCATAGGAATTCAGAGAGACAACAGCAGCAGAAGCCACAAAGGGAGGGTGGTTTTGCCAGGACAAAGTTAAGAGCTTTGAAAATTTATGGTGAATTGAATCAGAAAGTGAAGCATCCCATTTCACCAGGGAGTAGAATAGCTAGCTTCCTTAGCTCCATTTTCAACTCTGAGAATGTGAAGAAAGCTAAAATGTGTTACGTTGGGGCTGTTGAAGATGTTAGCTTTGAGCATAAATCAAAGTCCCCATGTTTCTCTTCCTCTGCTTCTTCCTTTTCTAGAAGGTCTTGTATGAGCAAAACACCCTCTTCAGCAAGAGGAAATTCCAACAATGGTGTCAAAAGGTCAGTGAGATTTTACCCTGTTAGCGTGATCCTTGGTGAGGATTCTGAACAACATTCTGATCAGAAATATATTTATGAGAGTGAACCAAGTTTGTTACCATTGTCTAATGTTCGAAAGAGTACGAGAAATTCTTCAATAAAGGAGCTGAAGAAGAACAATGTTATGGCAAAAGAAAATGGAGCTGAAGCAGTAGCACGTGGGTTTATAAAGGGTTACCAAAATTCTGGTAAGGGTGAATTTGATTTTAGAGGCTTTTATGAAGATGAGGATGATGAAGATGATGCTCTTAGTTGTTCAAGTTCAGATTTGTTTGAGCTTGATCACCTTATTGGAGCTGAAAGGTACCAACAAGAGCTTCCAGTTTATGAAACTACCAATTTAGAAACAAATAAGGCCATTGCTAATGGTCTGTGTTTGTAG 1170 0.4094 MHRRERSMREGSYPQRRRTPSFSSTLLDAIYRSIDESKTDLDEDQQQSLCHNQTTHTKQNHDVHSEKGGRERMNLRRAVMLEDWMEKQSSQSSQLLNSSSSSSECSSGGIFSSSETETTCKKQRSRPKCERSQKHDHRNSERQQQQKPQREGGFARTKLRALKIYGELNQKVKHPISPGSRIASFLSSIFNSENVKKAKMCYVGAVEDVSFEHKSKSPCFSSSASSFSRRSCMSKTPSSARGNSNNGVKRSVRFYPVSVILGEDSEQHSDQKYIYESEPSLLPLSNVRKSTRNSSIKELKKNNVMAKENGAEAVARGFIKGYQNSGKGEFDFRGFYEDEDDEDDALSCSSSDLFELDHLIGAERYQQELPVYETTNLETNKAIANGLCL. 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g00655 389 PANTHER PROTEIN BIG GRAIN 1-LIKE A-RELATED 1 388 IPR039621 GO:0009734
Seca12g00655 389 MobiDBLite consensus disorder prediction 57 72 - -
Seca12g00655 389 MobiDBLite consensus disorder prediction 84 155 - -
Seca12g00655 389 MobiDBLite consensus disorder prediction 37 72 - -
Seca12g00655 389 MobiDBLite consensus disorder prediction 219 247 - -
Seca12g00655 389 MobiDBLite consensus disorder prediction 85 118 - -
Seca12g00655 389 MobiDBLite consensus disorder prediction 119 145 - -
Seca12g00655 389 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g00655 Seca-Chr12 5898399 5899568 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g00655 - - gmx:100803228 469.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g00655 12 5898399 5899568 Seca4g11697 4 257101319 257102566 ECH
Seca12g00655 12 5898399 5899568 Seca4g01187 4 18976106 18977299 ECH
Seca12g00655 12 5898399 5899568 Seca12g00655 12 5898399 5899568 ECH