Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g09315 ATGGATGAAGGGAATGCCAAAATTTTCATACAAAACTCGATTCCAGGCGTGAGTTACGACGTGGCTGGACAGATTCAAATGATATGGGAAGTGGTCAAAGCGCCATTGATAGTTCCTCTGTTGAAGCTTGGGGTTTACATTTGCTTGGCAATGTCTCTAATGCTCTTCATGGAAAGGCTTTACATGGGTGTCGTTATCATCCTTGTTAAGCTCTTCTGGAAAAAACCAGAAAAGCGTTACAAATATGAGCCTATCCAAGACGACGTCGAATTAGGCAGCTCCAATTTCCCTACGGTTCTTGTGCAAATCCCAATGTTCAATGAAAGAGAGGTTTACAAAGTGTCCATTGGAGCAGCTTGTGGGCTTTCATGGCCTGCTGACCGTCTCGTGATTCAAGTTCTAGATGATTCCACTGACCCTGCTGTTAAGCAAATGGTGGAGCAAGAATGTCAGAGATGGGCAAGCAAAGGCATAAACATAACGTACCAAATCAGAGAAAACAGAACGGGTTATAAAGCGGGTGCATTGAAAGAAGGCTTAAAAAGAAGCTATGTGAAGCATTGTGAGTATGTGGCTATTTTCGATGCTGATTTCAGGCCAGAGCCAGATTTCCTAAGACGAGCAATTCCCTTCTTGGTGGGCAACCCTGAGATTGCTTTGGTTCAAGCTCGTTGGAGATTTGTAAATGCAGATGAGTGTTTGTTAACAAGAATGCAAGAAATGTCCCTGGATTACCATTTCACAGTAGAGCAAGAAGTTGGGTCAGCCACTCATGCTTTCTTTGGATTCAATGGGACAGCGGGTGTTTGGAGAATTGCTGCTATCAATGAAGCAGGAGGGTGGAAAGACAGAACAACAGTGGAGGACATGGATCTTGCTGTTCGTGCCAGTCTTAGGGGCTGGAAATTTTTGTACCTTGGAGACCTACAGGCAAAAAGTGAGCTTCCCAGTACTCTCAGAGCCTTCCGTTTCCAGCAGCATAGATGGTCTTGTGGTCCTGCTAATCTATTCCGCAAAATGGTGATGGAGATAGTAAGGAACAAGAAAGTAAAATTTTGGAAGAAAGTGTATGTTATATACAGCTTCTTCTTTGTTCGTAAAATCATAGCCCACATGGTCACCTTCTGCTTCTACTGTGTTGTGCTTCCCCTAACAATTTTGGTCCCTGAGGTTCATGTTCCAATATGGGGAGCTGTTTATATTCCTTCCATCATCACCATCCTCAATTCAGTGGGAACACCAAGGTCCATTCACCTATTGTTCTATTGGATCCTTTTTGAGAATGTGATGTCATTGCATCGTACCAAGGCAACCTTCATTGGTTTACTAGAAGCTGGGAGGGCTAATGAGTGGGTTGTTACTGAAAAACTTGGAGACTCTGTCAATAATAATAAGAATAAAGCAGGAGATGCTGCCAAGAACAAGACCAATGTTACCAAAGCAATTAAGAAACCTCGATTCAAATTTGGTGAAAGACTTCATTTATTGGAGCTTGGATTTGCTGCCTTCCTCTTCCTTTGTGGATGCTATGACTTTGTGCACGGGAAGAACAACTATTTTGTGTACCTCTTCCTTCAGACCTTAACCTTCTCAATTGTAGGATTTGGCTATGTTGGCACCATTGTCTAA 1629 0.4291 MDEGNAKIFIQNSIPGVSYDVAGQIQMIWEVVKAPLIVPLLKLGVYICLAMSLMLFMERLYMGVVIILVKLFWKKPEKRYKYEPIQDDVELGSSNFPTVLVQIPMFNEREVYKVSIGAACGLSWPADRLVIQVLDDSTDPAVKQMVEQECQRWASKGINITYQIRENRTGYKAGALKEGLKRSYVKHCEYVAIFDADFRPEPDFLRRAIPFLVGNPEIALVQARWRFVNADECLLTRMQEMSLDYHFTVEQEVGSATHAFFGFNGTAGVWRIAAINEAGGWKDRTTVEDMDLAVRASLRGWKFLYLGDLQAKSELPSTLRAFRFQQHRWSCGPANLFRKMVMEIVRNKKVKFWKKVYVIYSFFFVRKIIAHMVTFCFYCVVLPLTILVPEVHVPIWGAVYIPSIITILNSVGTPRSIHLLFYWILFENVMSLHRTKATFIGLLEAGRANEWVVTEKLGDSVNNNKNKAGDAAKNKTNVTKAIKKPRFKFGERLHLLELGFAAFLFLCGCYDFVHGKNNYFVYLFLQTLTFSIVGFGYVGTIV. 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g09315 542 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 22 540 - -
Seca4g09315 542 Pfam Glycosyl transferase family group 2 190 398 IPR001173 -
Seca4g09315 542 FunFam Glucomannan 4-beta-mannosyltransferase 9 88 316 - -
Seca4g09315 542 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 88 316 IPR029044 -
Seca4g09315 542 CDD CESA_CaSu_A2 97 333 - -
Seca4g09315 542 SUPERFAMILY Nucleotide-diphospho-sugar transferases 94 376 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g09315 Seca-Chr4 220937613 220943983 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g09315 1 542 Miscellaneous Gene Families AT5G22740 82.537 0.0 929
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g09315 K13680 - gmx:100788761 985.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g09315 4 220937613 220943983 Seca4g09315 4 220937613 220943983 ECH
Seca8g05233 8 142735072 142740521 Seca4g09315 4 220937613 220943983 ECH
Seca2g04755 2 133837144 133843428 Seca4g09315 4 220937613 220943983 ECH