Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g05049 ATGAGTACTTCAGCAATCAAAGCTTGGACTGTGGCAGCTAGTGTTGGGGTTGTGGAGGCCTTGAAGGACCAAGGCATCTGCAGGTGGAATTATGCTTTGAAGTCAGCTCAACAGCATGTGAAAAACCATGTGAGGTCGTTCTCTCAGGCAAAGAAGCTTTCTTCATCCTCTTCTTCTGCTATGGCAAGACTAAAAGATGACAAGGCAAAGCAGTCAGAGGAGTCTTTGAAGACTGTCATGTACTTAAGCTGCTGGGGTCCCAATTAG 267 0.4644 MSTSAIKAWTVAASVGVVEALKDQGICRWNYALKSAQQHVKNHVRSFSQAKKLSSSSSSAMARLKDDKAKQSEESLKTVMYLSCWGPN. 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g05049 88 PANTHER DUF3774 DOMAIN PROTEIN-RELATED 4 88 IPR022251 -
Seca4g05049 88 Pfam Wound-induced protein 11 87 IPR022251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g05049 Seca-Chr4 94054391 94054657 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g05049 - - twl:120000071 121.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g05049 4 94054391 94054657 Seca4g05049 4 94054391 94054657 ECH
Seca4g05529 4 104426198 104436667 Seca4g05049 4 94054391 94054657 PCT
Seca4g05049 4 94054391 94054657 Seca4g05528 4 104411483 104424216 PCT