Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g05529 ATGAGTTCAGCAAGCAGCAGAGCTTGGACAGTGGCAGCGAGTGTTGGAGTTGTGGAGGCCTTGAAGGACCAAGGTTTGTGCAGGTGGAATCATGCTTTGAGATCAGCTCAACATCATCTCAAGAACCATGTCAGATCCTTGTCTCAGGCAAAGAAACTCTCTCCTTCCTCTTCTGCTATGGTTTCGAACAGATTAAAGGAAGAGGAGGCAAAGCAATCAGAGGAATCGTTGAGGACAGTCATGTACTTAAGCTGCTGGGGTCCCAACAAGATGAGTTCAGCAAGCAGCAGAGCTTGGACAGTGGCAGCGAGTGTTGGAGTTGTGGAGGCCTTGAAGGACCAAGGTTTGTGCAGGTGGAATCATGCTTTGAGATCAGCTCAACATCATCTCAAGAACCATGTCAGATCCTTGTCTCAGGCAAAGAAACTCTCTCCTTCCTCTTCTGCTATGGTTTCGAACAGATTAAAGGAAGAGGAGGCAAAGCAATCAGAGGAATCGTTGAGGACAGTCATGTACTTAAGCTGTTGGGGTCCCAACAACTAG 543 0.4788 MSSASSRAWTVAASVGVVEALKDQGLCRWNHALRSAQHHLKNHVRSLSQAKKLSPSSSAMVSNRLKEEEAKQSEESLRTVMYLSCWGPNKMSSASSRAWTVAASVGVVEALKDQGLCRWNHALRSAQHHLKNHVRSLSQAKKLSPSSSAMVSNRLKEEEAKQSEESLRTVMYLSCWGPNN. 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g05529 180 PANTHER DUF3774 DOMAIN PROTEIN-RELATED 93 179 IPR022251 -
Seca4g05529 180 MobiDBLite consensus disorder prediction 137 162 - -
Seca4g05529 180 MobiDBLite consensus disorder prediction 51 70 - -
Seca4g05529 180 MobiDBLite consensus disorder prediction 137 153 - -
Seca4g05529 180 Pfam Wound-induced protein 101 178 IPR022251 -
Seca4g05529 180 Pfam Wound-induced protein 11 88 IPR022251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g05529 Seca-Chr4 104426198 104436667 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g05529 - - tpra:123898468 145.206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g05529 4 104426198 104436667 Seca4g05529 4 104426198 104436667 ECH
Seca4g05529 4 104426198 104436667 Seca4g05049 4 94054391 94054657 PCT
Seca4g05531 4 104468756 104469031 Seca4g05529 4 104426198 104436667 PCT