Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g05528 ATGTGTGCACCACGCGGAGCTTTGGTTGTTGCAACCACTGTTGGAGTAGTGGAGACCTTGAAGGATCAAGGGTATTGCAGATGGAGCAATACCATGAGATCAATAGCCCAACGTGCCAAGAACCAAATAAGGTCTTCACCTCAGGCCAAGAAGCTGTCTACTACTCCTTCTTCAGCAATCTCAAAAAAGCTGAGAGATGAGAAGAGGAGAAAGTGTGTGAAGATGAGTAGTTGTGCAACAAGCAAGGCTTGGGTTGTGGCTGCCAGTGTTGGAGCCGTGGAGGCTTTGAAGGACCAGGGTATTTGCAGGTGGAACCATACTTTAAGGCAGGCTCAGCAGCATCTCAAAAACCATGTTAGATCCTTGTCTCAAGCGAGGAATCTCTCTTGTTCTTCTTCTTCTGCTCTTGTTGCAACCAAATTAAAGGATGACAAGAAGGCCAAGCAAGCAGAGGAGTCCTTGAGGACCGTCATGTACTTGAGCTGCTGGGGTCCCACAAGCAAGGCTTGGGTTGTGGCTGCCAGTGTTGGAGCCGTGGAGGCTTTGAAGGACCAGGGTATTTGCAGGTGGAACCATACTTTAAGGCAGGCTCAGCAGCACCTCAAAAACCATGTTAGATCCTTATCTCAAGCAAGGAATCTCTCTTCTTCTTCTTCTCTTGTTGCAACCAAATTAAAGGATGACAAGAAGGCCAAACAAGCAGAGGAGTCCTTAAGGACCGTCATGTACTTGAGCTGCTGGGGTCCCAATAACTGA 756 0.4815 MCAPRGALVVATTVGVVETLKDQGYCRWSNTMRSIAQRAKNQIRSSPQAKKLSTTPSSAISKKLRDEKRRKCVKMSSCATSKAWVVAASVGAVEALKDQGICRWNHTLRQAQQHLKNHVRSLSQARNLSCSSSSALVATKLKDDKKAKQAEESLRTVMYLSCWGPTSKAWVVAASVGAVEALKDQGICRWNHTLRQAQQHLKNHVRSLSQARNLSSSSSLVATKLKDDKKAKQAEESLRTVMYLSCWGPNN. 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g05528 251 Coils Coil 108 128 - -
Seca4g05528 251 MobiDBLite consensus disorder prediction 40 66 - -
Seca4g05528 251 Pfam Wound-induced protein 172 249 IPR022251 -
Seca4g05528 251 Pfam Wound-induced protein 10 70 IPR022251 -
Seca4g05528 251 Pfam Wound-induced protein 86 165 IPR022251 -
Seca4g05528 251 PANTHER DUF3774 DOMAIN PROTEIN-RELATED 5 71 IPR022251 -
Seca4g05528 251 Coils Coil 194 214 - -
Seca4g05528 251 MobiDBLite consensus disorder prediction 40 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g05528 Seca-Chr4 104411483 104424216 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g05528 - - twl:120000071 151.369
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g05528 4 104411483 104424216 Seca4g05528 4 104411483 104424216 ECH
Seca4g05049 4 94054391 94054657 Seca4g05528 4 104411483 104424216 PCT