Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01668 ATGGCGAATGAAAAGGAAGTAGAGCAACAGACAAAGATAAGCAAGATCCTCCTCATAATAAACTGCATCATGTTAGCCGTAGGCACCACCGGTGGTCCCCTCGTAACGCGTCTCTATTTCATCCACGGCGGCCACCGTGTCTGGCTCTCCAGCTTCCTCCAAACCGCCGCCTTCCCTCTCATGCTATTTCCCCTCTCTATTTCATACATCTACCGCCGCCAGAGCCACCGTCCAACCACCGCCGGCAGCACGAAATTAAAGATGATCTCTATTAAGCCTCGTTTATTTTTCGCCTCTGCTTTCATCGGTATCCTCACCGGCCTCGACGATTACCTCTATGCCTATGGCGTGGCTCGGCTTCCAGTTTCCACTTCTGCGTTAATCATCGCTTCTCAGTTGTCCTTCACCGCCGTCTTCGCTTTCTTGTTAGTGAGGCAGAGGTTCACGACATACTCGGTAAACGCCGTCGTTTTGCTCACAGTTGGAGCGGCAGTTTTGGCTATGCACACTAATGGAGACCGTCTTGCTGGCGAGTCTATTAAGCAATATGTGTTGGGTTTTGTTATGTCGGTAGTAGCTGCTGCATTGTATGGGTTTATTTTGCCTCTAGTGGAATTGATGTACAAAAAGACCAACCAGCCTATCACTTACTCTCTCGTCATGGAGATTCAGTTTGTTACGTGCTTCTTTGCCACTCTCTTTTGCACCGTTGGGATGATCATAAATAATGATTTTGAGGTTGTGATTCCGAGAGAAGTGAGAAATTTTGACCTTGGGGAAGTTAATTACTATGTTGTGCTGGTGGCGAGTGCAATTATGTGGCAGGCTTTTTTCTTGGGTGCAATAGGGGTCATATTTTGTGCTTCTTCTTTGTTATCTGGTATTTTAATTGCGTTGTTGCTTCCTGTAACTGAAGTCTTGGCTGTTATTTTCTACAAAGAGAAATTTCAAGCAGAGAAAGGGGTTTCTCTGATTCTCTCCCTCTGGGGCTTTTTCTCGTACTTTTATGGTGAGATCAAGCAAGGCAAGGAAATGAAGAAGAAGAATAGCATCACAGAAACAGAGCTGCCGCAAACTCTTCCTGATCCTTGA 1092 0.4615 MANEKEVEQQTKISKILLIINCIMLAVGTTGGPLVTRLYFIHGGHRVWLSSFLQTAAFPLMLFPLSISYIYRRQSHRPTTAGSTKLKMISIKPRLFFASAFIGILTGLDDYLYAYGVARLPVSTSALIIASQLSFTAVFAFLLVRQRFTTYSVNAVVLLTVGAAVLAMHTNGDRLAGESIKQYVLGFVMSVVAAALYGFILPLVELMYKKTNQPITYSLVMEIQFVTCFFATLFCTVGMIINNDFEVVIPREVRNFDLGEVNYYVVLVASAIMWQAFFLGAIGVIFCASSLLSGILIALLLPVTEVLAVIFYKEKFQAEKGVSLILSLWGFFSYFYGEIKQGKEMKKKNSITETELPQTLPDP. 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01668 363 SUPERFAMILY Multidrug resistance efflux transporter EmrE 90 170 - -
Seca4g01668 363 PANTHER OS09G0467300 PROTEIN-RELATED 9 349 IPR030182 GO:0015211|GO:0016020
Seca4g01668 363 Pfam Purine nucleobase transmembrane transport 16 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01668 Seca-Chr4 27134545 27136276 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g01668 15 347 Organic Solute Cotransporters AT1G28220 58.859 1.03e-141 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g01668 - - gmx:100803818 511.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g01668 4 27134545 27136276 Seca4g01668 4 27134545 27136276 ECH
Seca8g01909 8 39442611 39444356 Seca4g01668 4 27134545 27136276 PCT
Seca4g01668 4 27134545 27136276 Seca6g03111 6 97334923 97336801 PCT