Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g03111 ATGGGCGTCCTCGGAGCAATGGCAAGACATTTGGATACAATTATAGGGCCTGGAGTAATGCTTGTTTATCCTTTGTATGCATCAATGAGGGCGATTGAGAGTCCTTCAACCTTGGATGATCAGCAGTGGCTAACATATTGGGTTTTATACTCCTTCATCACCCTCTTTGAACTTTCATTTTATAAGATCCTAGCATGGTTTCCAATTTGGCCATACATGAAGCTTGTGTTTTGCGGGTGGTTGGTATTGCCAATGTTCAATGGAGCTGCATACATATATGAGAACTATGTGAGGCAATACATAAAGAAAATAGGAAGCTATGGTGGAGGTTCCAATTATCCTGAGGAGCAAAAGAAAGTCCTTCAGATGATGAGCTTGGATGCAAGAAAAGCTGTTGAACGTTATATAGATAGATATGGTTCTGATGCCTTTGAGAGAGTAATCAGAGCAGCTGATAAAGAAGCAAGGAAGCACTGA 477 0.4109 MGVLGAMARHLDTIIGPGVMLVYPLYASMRAIESPSTLDDQQWLTYWVLYSFITLFELSFYKILAWFPIWPYMKLVFCGWLVLPMFNGAAYIYENYVRQYIKKIGSYGGGSNYPEEQKKVLQMMSLDARKAVERYIDRYGSDAFERVIRAADKEARKH. 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g03111 158 PANTHER HVA22-LIKE PROTEINS 19 118 IPR004345 -
Seca6g03111 158 Pfam TB2/DP1, HVA22 family 24 100 IPR004345 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g03111 Seca-Chr6 97334923 97336801 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g03111 K17279 - gmx:100819566 296.589
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g01668 4 27134545 27136276 Seca6g03111 6 97334923 97336801 PCT