Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g01909 ATGGTGGAAGGCGGAAAGGAAGAAGAAGAACAACAACAACAACAAGGCAGAAGAAACATGAAGAGAGTCCTTTTGGTAGTAAACTCCATCTTCTTATCCATAGGCACCTCTGCTGGCCCACTCGTAATGCGTCTTTACTTCATCCACGGCGGCAAACGCATGTGGCTCTCCAGCTTCCTCGAAACCGCTGCCTTTCCCATCATTCTCATTCCCCTAACCATCTCTCACATCCATAACCGTCACCTAACCACCTCCACAAAACCAAACCTTATCTCCATGAAACCTCCTCTGTTCATCGCCTCCGCCATCATCGGCATCCTCACCGGCCTCGACGATTACCTCTACGCTTGCGGCATAGGTCGTCTTCCGGTGTCCACTGCTTCTCTTATTCAAGCTTCTCACCTCGCTTTCACTGCCATCTTCGCGTTCCTTCTTGTGAGGCACAAGTTCACGGCCTACTCGGTGAACTCCATCGTGTTGCTGACACTCGGTGCTGTCGTTTTGGCTCTTCGTTCGAGTGGGGATCGTCCCGTTGGTGAGTCGACTCGGGAGTATGTGATTGGTTTTTTTATGATTGTGGCGGCTGCGGCTTTGTATGGATTCGTTTTGCCGTTGATGGAGTTGGTGTACAAAAAGAGCCAGCAACGTATCACTTACTCGTTGGTCATGGAGATTCAGTTTGTTATGTGCTTCTTTGCTACTCTGTTCTGCATTATTGGGATGATCATAGACAACGACTTTGAGGTGATTCCAAGAGAAGCGAGAGATTATAAACTTGGGGAAGCTAAGTACTATGTGGTGTTGGTGTGGAGTGCTGTAATGTGGCAGTTTTTCTTCTTGGGAGCAATAGGGGTTATCTTTTGTGCCTCGTCTTTGTTATCTGGTATTATAATTGCAGCGTTTCTTCCCGTAACGGAAATCTTGGCTGTTATTGTGTACAAAGAGAATTTCCAAGCAGAGAAGGGGGTTGCTTTGGTACTCTCTCTTTGGGGTTTTGTGTCTTACTTTTATGGTGAGGTTAGAGAAGACAGGAAGAAGAAAGAAACAGAGATGCCTCAATTAAGTCTTCATCCCAATACATGA 1083 0.4681 MVEGGKEEEEQQQQQGRRNMKRVLLVVNSIFLSIGTSAGPLVMRLYFIHGGKRMWLSSFLETAAFPIILIPLTISHIHNRHLTTSTKPNLISMKPPLFIASAIIGILTGLDDYLYACGIGRLPVSTASLIQASHLAFTAIFAFLLVRHKFTAYSVNSIVLLTLGAVVLALRSSGDRPVGESTREYVIGFFMIVAAAALYGFVLPLMELVYKKSQQRITYSLVMEIQFVMCFFATLFCIIGMIIDNDFEVIPREARDYKLGEAKYYVVLVWSAVMWQFFFLGAIGVIFCASSLLSGIIIAAFLPVTEILAVIVYKENFQAEKGVALVLSLWGFVSYFYGEVREDRKKKETEMPQLSLHPNT. 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g01909 360 Pfam Purine nucleobase transmembrane transport 24 345 - -
Seca8g01909 360 SUPERFAMILY Multidrug resistance efflux transporter EmrE 94 173 - -
Seca8g01909 360 PANTHER OS09G0467300 PROTEIN-RELATED 8 349 IPR030182 GO:0015211|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g01909 Seca-Chr8 39442611 39444356 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g01909 19 360 Organic Solute Cotransporters AT2G33750 56.977 5.97e-137 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g01909 - - ccaj:109789210 551.592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g01909 8 39442611 39444356 Seca8g01909 8 39442611 39444356 ECH
Seca8g01909 8 39442611 39444356 Seca4g01668 4 27134545 27136276 PCT