Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04781 ATGCAGAGTGAGCAACAGAGCAACAACCAGTTGGTAGTTCAAAATTCAGGAAGCCTCAGCTTCAGCAGCCATTTGTCTAAGGAAGATGAGGAGATGTCAAGGTCTGCTCTTTCCACCTTCAGGGCCAAAGAGGAAGAGATTGAAAGGAAGAAGATGGAGGTCAGAGAGAAGGTTCAGCTCCAGTTGGGTAGTGTAGAGGAAGAAACCAAGCGTCTTGCTACCATTCGTGAGGTAGAGCTTGAAGCCCTTGCAGATCCAATGAGGAAGGAAGTTGCACTTGTCCGAAAAAAGATTGATTCCGTAAACAAAGAATTAAAGCCACTAGGCCATACCTGCCAGAAGAAGGAGAAAGAATACAAAGAAGCCCTTGAAGCTTTTAATGAAAAGAACAGAGAAAAAGTACAGCTAATTACCAGGCTAATGGAGCTGGTGAGTGAAAGTGAAAGATTGAGGATGAAGAAGCTGGAGGAGCTGAGTAAGAACATAGATTCCATGCAATGA 501 0.4411 MQSEQQSNNQLVVQNSGSLSFSSHLSKEDEEMSRSALSTFRAKEEEIERKKMEVREKVQLQLGSVEEETKRLATIREVELEALADPMRKEVALVRKKIDSVNKELKPLGHTCQKKEKEYKEALEAFNEKNREKVQLITRLMELVSESERLRMKKLEELSKNIDSMQ. 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04781 166 Pfam Transcriptional activator 14 164 IPR007033 -
Seca2g04781 166 Coils Coil 37 57 - -
Seca2g04781 166 PANTHER RAB6-INTERACTING PROTEIN GORAB 4 164 IPR007033 -
Seca2g04781 166 MobiDBLite consensus disorder prediction 1 45 - -
Seca2g04781 166 Coils Coil 112 132 - -
Seca2g04781 166 MobiDBLite consensus disorder prediction 1 23 - -
Seca2g04781 166 MobiDBLite consensus disorder prediction 24 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04781 Seca-Chr2 134156808 134159050 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04781 - - gmx:100499923 277.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g04781 2 134156808 134159050 Seca8g06983 8 165311412 165313115 ECH
Seca2g04781 2 134156808 134159050 Seca2g04781 2 134156808 134159050 ECH
Seca2g04781 2 134156808 134159050 Seca4g09340 4 221515993 221517997 ECH