Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g09340 ATGGCAACACCAAAACGGTCATATGATCAGCAAGCACAACAACCAAATGTGCAGCAAGTGAAGAACTCAGGGATAATTAGCTACAACCAAAGCCCAAGAAGAGATGATAAGGAAGAAGAGATGTCAAGATCAGCTCTAGCAATGTTCAGAGCAAAGGAAGAAGAAATTGAGAGAAGAAAATTGGAGGTGAGGGATAAGGTTCATGCTCATCTGGGTCGAGTTGAAAAGGAAACAAAGCGCTTGGCAGAGATTAGAGAAGAGCTTGAGGGCTTCACAGATCCAATGAGGAAGGAAGTTGCAATAGTTCGAAAGAAGATAGACATTGTTAACAAAGAGTTGAAGCCACTGGGCCAAACCTGCCAGAGAAAGGAGAGAGAATACAATGAAGCCCTTGAGACTTTCAATGAGAAAAACAGAGAAAAGGCTCAACTTGTTACCAAATTAGTGGAGCTGGTGGCTGAAAGTGAGAGGTTGAGGATGAAGAAGCTGGAGGAGCTGAGCAAAAACATAGATACCTTGAACTGA 525 0.4286 MATPKRSYDQQAQQPNVQQVKNSGIISYNQSPRRDDKEEEMSRSALAMFRAKEEEIERRKLEVRDKVHAHLGRVEKETKRLAEIREELEGFTDPMRKEVAIVRKKIDIVNKELKPLGQTCQRKEREYNEALETFNEKNREKAQLVTKLVELVAESERLRMKKLEELSKNIDTLN. 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g09340 174 Coils Coil 120 140 - -
Seca4g09340 174 Pfam Transcriptional activator 21 172 IPR007033 -
Seca4g09340 174 PANTHER RAB6-INTERACTING PROTEIN GORAB 11 172 IPR007033 -
Seca4g09340 174 MobiDBLite consensus disorder prediction 1 30 - -
Seca4g09340 174 MobiDBLite consensus disorder prediction 1 43 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g09340 Seca-Chr4 221515993 221517997 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g09340 - - gmx:100796368 290.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g09340 4 221515993 221517997 Seca4g09340 4 221515993 221517997 ECH
Seca2g04781 2 134156808 134159050 Seca4g09340 4 221515993 221517997 ECH