Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g06983 ATGTGCCTAGTTTGCAGCAGCAGAGACAAAATGCAGAAAATGAAGAACCTTGGGAGTATTGGAAGCAGTGGGAGGCTATCAACAGAAGAGTATGAGGATGAGGAGGTTTCAAAATTGGCCATTTCCACATTTCAAGCCAAGGAAGAAGAGATTGAGAGGAAAAAGATGGAGGTGAAAGAGAGAGTTGAACTTCAACTTGGACGTGCTGAAGAAGAGACTAGGCGCTTAGCACACATTTGGGAAGAGCTTGAAGTGCTGGAAGATCCTATGAGGAAGGAAGTTGCAATGGTACGCAAGAAGATTGACTTAGCTAACAGAGATTTAAAGCCACTGGGACAGAACTGCCAGAAAAAGGAAAAAGAGTATAAAGAAGCCTTGGAAGCTTTCAACGAAAAGAACAAAGAGAAAGCTCATCTGGTAGCAGCATTAATTGAGCTGCTGACTGAGAGTGAAAGGCTGAGGATGAAGAAGCTGGAGGAGCTATGCAGGACCGTAGAGTCTATGTCATTGAAACAATAA 519 0.4335 MCLVCSSRDKMQKMKNLGSIGSSGRLSTEEYEDEEVSKLAISTFQAKEEEIERKKMEVKERVELQLGRAEEETRRLAHIWEELEVLEDPMRKEVAMVRKKIDLANRDLKPLGQNCQKKEKEYKEALEAFNEKNKEKAHLVAALIELLTESERLRMKKLEELCRTVESMSLKQ. 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g06983 172 Coils Coil 115 135 - -
Seca8g06983 172 Pfam Transcriptional activator 15 167 IPR007033 -
Seca8g06983 172 Coils Coil 41 61 - -
Seca8g06983 172 PANTHER RAB6-INTERACTING PROTEIN GORAB 10 167 IPR007033 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g06983 Seca-Chr8 165311412 165313115 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g06983 - - gmx:100794044 285.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g04781 2 134156808 134159050 Seca8g06983 8 165311412 165313115 ECH
Seca8g06983 8 165311412 165313115 Seca8g06983 8 165311412 165313115 ECH