Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g00386 ATGTATCCTGATTTGGACACCTGTTCACATGGTGAGATGGCTGTTGCAACCTTCAAAGGACCTCCTAGAGAGTGCTGTGGGAATAAGACAATGGAAAGAAAACCTTCTGGGAGGAGACGTGTATTTGTTCAGACTGAATCTGGGTGTGTTTTGGGGATGGAATTGGATAGAAGTGACAATGCCCATACTGTGAAGAGAAAATTACAGGTTGCATTTAATGTCCCAACTGAGGAAAGCTCACTTATATGTGGGGACATGGTCTTGAAAAATGATCTAAGTGTGGTTAGAAATGATTCTCCACTTCTTCTCACCAGGAACTTTTTACATAGGAGTTCATCTACCCCGTGCCTTTCACCTACTGGTAGGGATCTTCAGCAGAGAGATCAGAGTGGACCAATTGAGATTATAGGTTGCTCAGATGTATTTTCTGGAACAAAACAACTGGCTAAGGATATCATGAAGGCATTAAAAGTTGGCATTGAACCCACCCCCATTCAGAGTGGATTGGGAGGTGCATATTATTTTAGAAACTGCCATGGTGACAATGTTGCTATTGTGAAACCAACTGATGAGGAACCTTATGCACCAAACAATCCAAAAGGTTTTGTTGGTAAAGCTCTTGGACAGCCAGGACTGAAACGGTCAGTGAGGGTTGGGGAGACAGGTTTCAGAGAAGTGGCAGCTTACCTTCTTGACCATGATCATTTTGCCAATGTGCCTTCTACTGCCCTTGTGAAGGTGACACGTTCTATTTTTAATGTTAATGACAGGGTCAATGGTAGTATGCATCCTAACAAGAAGCAAATAAGCAAAATTGCATCACTGCAGCAGTACATTCCTCATGATTTTGATGCAAGTGATCATGGAACTTCTAGTTTCCCTGTTGCTGCTGTTCATAGGATTGGGATTTTAGACATACGAATTTTAAACACAGACAGACATGCAGGAAATCTTCTGGTCAGGAAGCTTGAAGGGTTTGGAAGGTTTGATCAGGTGGAGCTTTTTCCCATTGATCATGGTCTTTGTCTACCTGAAAATTTGGAAGATCCATATTTTGAATGGATCCATTGGCCTCAGGCATCTATTCCTTTCTCTGATGATGAGCTCAAATATATATCTCACCTGGACCCATTTCGGGATTCAGATATGCTTAGAATGGAGCTGCCCATGATTCGAGAAGCATGCTTGCGGGTTTTGGTTCTGTGCACTTTATTCCTCAAAGAAGCAGCAGCCTTTGGTCTTTGTCTAGCAGAGATTGGCGACATGATGAGTAGGGAATTTCAGGGTCATGATGAAGAGCCCAGTGAGCTTGAGCTCATATGTATTGAAGCAAAGAAACTGTTAGATCAGGAAGAATGCTCTTATTTTGAGGCAGAAGTAGGAGACAAAGATGTGACCCTGTTTCACTTAGATTCTGAGGATCAGGATTTGGATTTTACTACAAATATAGAAGAGAAGCTGACATTATTTCCACCTTCTCAATTTGGAGCAAAAACTGGAAACGGTAGAACCACACTTTCTAAACTAGAAGAAAGTGTGATTGAGGAGGAGGAGGAGGAGGCTGGGAGTGAAGGTGAGTTACCCTTAGCTGCAGATGAATACACTGACCCTGAGGGAAATTGTGTGCCCAATATTTCAAACCTATCCGTGTCTGTGAAGAACACGAGAATTGGTGAGAAAAGTTGGCAGCAATTGGGTGTAAAGCAAAAGAGTGGCTTTTTGGCCGGCACATCATCTGGAAACACGAGTGTGAATGAGTTGCCAGCAAGCTCAAGTTTTGTGAAGCTGACAGATATGAATGAAGAGAAGTGGAACCAGTTTCTTGAGAATTTTCACAGGTTGTTGATCCCAGCTTTTAATAATTGCAAACGATGGAATGTGGGTAAGAGGCAGAGGCAGAGACTTGGAACTTCATGCCAGTTTTAG 1926 0.4258 MYPDLDTCSHGEMAVATFKGPPRECCGNKTMERKPSGRRRVFVQTESGCVLGMELDRSDNAHTVKRKLQVAFNVPTEESSLICGDMVLKNDLSVVRNDSPLLLTRNFLHRSSSTPCLSPTGRDLQQRDQSGPIEIIGCSDVFSGTKQLAKDIMKALKVGIEPTPIQSGLGGAYYFRNCHGDNVAIVKPTDEEPYAPNNPKGFVGKALGQPGLKRSVRVGETGFREVAAYLLDHDHFANVPSTALVKVTRSIFNVNDRVNGSMHPNKKQISKIASLQQYIPHDFDASDHGTSSFPVAAVHRIGILDIRILNTDRHAGNLLVRKLEGFGRFDQVELFPIDHGLCLPENLEDPYFEWIHWPQASIPFSDDELKYISHLDPFRDSDMLRMELPMIREACLRVLVLCTLFLKEAAAFGLCLAEIGDMMSREFQGHDEEPSELELICIEAKKLLDQEECSYFEAEVGDKDVTLFHLDSEDQDLDFTTNIEEKLTLFPPSQFGAKTGNGRTTLSKLEESVIEEEEEEAGSEGELPLAADEYTDPEGNCVPNISNLSVSVKNTRIGEKSWQQLGVKQKSGFLAGTSSGNTSVNELPASSSFVKLTDMNEEKWNQFLENFHRLLIPAFNNCKRWNVGKRQRQRLGTSCQF. 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g00386 641 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 13 637 IPR044571 -
Seca2g00386 641 SUPERFAMILY Ubiquitin-like 34 93 IPR029071 -
Seca2g00386 641 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 159 456 IPR000403 -
Seca2g00386 641 Pfam Phosphatidylinositol 3- and 4-kinase 170 419 IPR000403 -
Seca2g00386 641 CDD Ubl_ubiquitin_like 41 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g00386 Seca-Chr2 5313818 5317941 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g00386 1 641 Acyl Lipid Metabolism Gene Families AT1G26270 62.096 0.0 758
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g00386 - - gmx:100792780 1112.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g00386 2 5313818 5317941 Seca2g00386 2 5313818 5317941 ECH
Seca2g00386 2 5313818 5317941 Seca2g05575 2 142056215 142060038 ECH
Seca2g00386 2 5313818 5317941 Seca12g06602 12 158110366 158113358 PCT