Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01286 ATGGGTAGTTACCGTGTCTGTGTCTGTTTCCGGCGGAGGTTCAAATCGGCGGAGGTGGTGGCTCCCCAGGAAGTCCGGGATCTCTTCAACAAATACTCAGATGGTGGGCCCCACATGACCCCCGACCAGCTCCGCCGCTTCCTCACGGAGGTTCAAGACGAGGTGGTGGTCGACGACGACGACCCACAGAAGGTGGTGGAGCTGGTGTTGCAAAAACGACATCACTTTACAAAGTTCGCAAGGCATAGCCTCACCCTTGATGACTTTCTTCACTACCTCTTCTCCTCAGAACTCAACCCCCCCATTGGATCTCAGGTTAATGAGGATATGACGGCTCCGTTGTCCCATTATTTCATTTATACTGGTCATAACTCCTATCTCACTGGAAATCAACTCAGCAGTGATTGTAGTGATGTCCCCATTATAAAGGCATTGAAGAGAGGGGTGAGAGTGGTGGAGCTTGATATATGGCCAAATTCTTCCAAAGATGATATACAAGTTTTACATGGAAGGACATTGACAACCCCTGTGGAGTTCATCAAATGTTTGCAATCCATTAAAGAACATGCTTTCTCTGCATCTCCCTACCCAGTCATAATAACTCTAGAAGACCATCTTACACCAGACCTTCAAGCTAAAGCTGCTCAGATGATTACTCAAACATTTGGAGATATGCTTTTCCGTCCGAATCATGAAAACTTAAAAGATTTTCCTTCACCCGAAGAATTGAAGTATCGGATCATGATATCAACAAAGCCTCCAAAAGAGTACCTAAAATCCGAAAGTGTGAAGGAGAATTCCCAAAAATTGATGAAATCAAAGGACTCTGATGAAGATGAATGGGGAACAGAAGTCATTGATGTTGCCAAAGCCCAAAATGAAGATGAAATGGGTGACTCTGATACAAATCAACAGAGTGATGATGATGATGAATCAAACGACGATGACTCTGAAACAAATCTGGAGAGTGATTATAAGCGTCTAATTGCTATTCATGCTGGAAAACCAAAAGGCAGTCTCAAGGAAGCATTAAAAGTTGAAAATGATAAAGTTAGACGCCTTAGCTTAAGTGAACAAGCCCTTGAAAAGGCTGCTGAGTCTCTTGGAACTGATCTTATTAGATTCACCCAGAAAAACTTTTTGAGGGTGTACCCCAAGGGTACAAGGTTCAATTCCTCCAACTACAAGCCACTGGTTGGATGGATGCATGGTGCTCAAATGGTTGCATTCAATATGCAGGGATATGGCAGAAATCTTTGGTTGATGCATGGAATGTTTAGATCCAATGGGGGATGTGGTTATGTCAAAAAGCCAGACTTTCTTATGAATGTAGGTCCAAATAATGAGGTATTCAATCCTAAAGATGAGTTGCAAGTGAAGAAGACTCTAAAGGTGAAAGTATATGTGGGAGATGGATGGCGTATGGATTTCAAACAAACTCACTTCGATTCCTATTCTCCACCAGATTTTTATGCCAGGGTTGGTATAGCGGGAGTGCCAGCTGATATAACAATGAAGAAAACGAAGATATTAGAGGATAATTGGATACCTTCTTGGGAAGAAGAGTTCACCTTCCCTTTAATTGTCCCTGAACTTGCTTTGCTCAGAGTGGAAGTGCATGAATATGACATGTCTGAGACAGATGATTTTGCAGGCCAAACTTGTTTACCTGTCACTGAACTAAAGCAAGGGATCCGTGCAGTTCCACTCTATGATCGTAAAGGAGAGAAGTACAACTCAGTTAGGCTTCTTATGAGATTTGAGTTTATTTAA 1773 0.4264 MGSYRVCVCFRRRFKSAEVVAPQEVRDLFNKYSDGGPHMTPDQLRRFLTEVQDEVVVDDDDPQKVVELVLQKRHHFTKFARHSLTLDDFLHYLFSSELNPPIGSQVNEDMTAPLSHYFIYTGHNSYLTGNQLSSDCSDVPIIKALKRGVRVVELDIWPNSSKDDIQVLHGRTLTTPVEFIKCLQSIKEHAFSASPYPVIITLEDHLTPDLQAKAAQMITQTFGDMLFRPNHENLKDFPSPEELKYRIMISTKPPKEYLKSESVKENSQKLMKSKDSDEDEWGTEVIDVAKAQNEDEMGDSDTNQQSDDDDESNDDDSETNLESDYKRLIAIHAGKPKGSLKEALKVENDKVRRLSLSEQALEKAAESLGTDLIRFTQKNFLRVYPKGTRFNSSNYKPLVGWMHGAQMVAFNMQGYGRNLWLMHGMFRSNGGCGYVKKPDFLMNVGPNNEVFNPKDELQVKKTLKVKVYVGDGWRMDFKQTHFDSYSPPDFYARVGIAGVPADITMKKTKILEDNWIPSWEEEFTFPLIVPELALLRVEVHEYDMSETDDFAGQTCLPVTELKQGIRAVPLYDRKGEKYNSVRLLMRFEFI* 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01286 590 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 462 589 IPR035892 -
Rops9g01286 590 PRINTS Phospholipase C signature 556 566 IPR001192 GO:0035556
Rops9g01286 590 PRINTS Phospholipase C signature 401 419 IPR001192 GO:0035556
Rops9g01286 590 PRINTS Phospholipase C signature 236 253 IPR001192 GO:0035556
Rops9g01286 590 PRINTS Phospholipase C signature 113 131 IPR001192 GO:0035556
Rops9g01286 590 PRINTS Phospholipase C signature 380 401 IPR001192 GO:0035556
Rops9g01286 590 PRINTS Phospholipase C signature 139 159 IPR001192 GO:0035556
Rops9g01286 590 Pfam C2 domain 462 564 IPR000008 -
Rops9g01286 590 SUPERFAMILY EF-hand 9 100 IPR011992 -
Rops9g01286 590 SMART C2_3c 462 570 IPR000008 -
Rops9g01286 590 SMART plcy_3 325 442 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Rops9g01286 590 MobiDBLite consensus disorder prediction 300 318 - -
Rops9g01286 590 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 108 252 - -
Rops9g01286 590 Gene3D - 18 100 - -
Rops9g01286 590 FunFam Phosphoinositide phospholipase C 457 590 - -
Rops9g01286 590 SUPERFAMILY PLC-like phosphodiesterases 108 443 IPR017946 GO:0006629|GO:0008081
Rops9g01286 590 SMART plcx_3 108 252 IPR000909 -
Rops9g01286 590 MobiDBLite consensus disorder prediction 257 297 - -
Rops9g01286 590 Pfam Phosphatidylinositol-specific phospholipase C, X domain 110 252 IPR000909 -
Rops9g01286 590 Gene3D Phosphatidylinositol (PI) phosphodiesterase 104 455 IPR017946 GO:0006629|GO:0008081
Rops9g01286 590 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 8 589 IPR001192 GO:0035556
Rops9g01286 590 Gene3D C2 domain 456 590 IPR035892 -
Rops9g01286 590 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 355 441 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Rops9g01286 590 Pfam Phosphoinositide-specific phospholipase C, efhand-like 23 97 IPR015359 -
Rops9g01286 590 CDD C2_PLC_like 460 589 - -
Rops9g01286 590 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 352 440 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Rops9g01286 590 MobiDBLite consensus disorder prediction 256 322 - -
Rops9g01286 590 ProSiteProfiles C2 domain profile. 436 572 IPR000008 -
Rops9g01286 590 CDD PI-PLCc_plant 109 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01286 Rops-Chr9 21385808 21390397 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01286 1 590 Acyl Lipid Metabolism Gene Families AT5G58700 63.406 0.0 791
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01286 K05857 - tcc:18590491 881.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g01286 9 21385808 21390397 Rops9g01286 9 21385808 21390397 ECH
Rops9g01286 9 21385808 21390397 Rops11g03956 11 73746380 73750916 ECH
Rops9g01286 9 21385808 21390397 Rops9g00833 9 12891846 12897127 ECH