Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00151 ATGGGTGGGGAAGCAATAGAAGAGCCTTTGATTCAAGGGTCTCCTTCCAAGGATGTGTCAGGAGAAGAGCCTTTAAGGAGAACAGGTGATGTGTGGAGCGCAGCAGCACATATAATAACAGGAGTGATAGGGGCAGGTGTGCTGTCACTAGCATGGTCGGTGGCTCAGTTAGGATGGATTGCTGGTCCTTTGGTCATTCTACTCTTTGCAGCCACTACCCTCATTTCAACATACCTTCTTTCTGACTGCTATAGATTCCCTCATCCTGAATATGGAACCATAAGAAGCTCCTCCTACATGGGTGCTGTCAAGTTGTACCTGGGAGAGATAAGAGAGAAGGTGTGTGGAGTGCTGGTGCACGCTACCTTATATGGGACTACCACGGCATATGTCATTACATCTGCTATCAGCATAAGAGCGATATTGAAATCAAATTGCTATCACAAGGAAGGACATCAGGCTCCATGTAAATATGGGGATAGCGTGTATATGATACTGTTTGGACTTGTTCAGGTTGTAATGTCATTCATACCAGATCTCCACAACATGGCATGGGTTTCAGTTGTTGCGGCCATAATGTCCTTTACATACTCATCTATTGGACTAGGACTTGGTATCACAACAGTAATAGAAAATGGAAGAATTATGGGGAGTGTAACAGGAGTACCAACTTCAAATATAGCTGACAAGTTATGGTTAGTCTTCCAAGCACTTGGTGATATTGCCTTTGCCTATCCATACACAGTCATCCTCCTTGAGATACAGGACACTCTAGAGTCACCTCCACCAGAAAACAAGACCATGAAAAAGGCCTCCGTGATTGCTATCTTCATTACAACATTCTTCTATCTCTGTTGTGCATGCTTTGGATATGCAGCTTTTGGAAATCAAACACCAGGAAACCTCTTGTCAGGGTTTGGATTTTATGAGCCTTACTGGCTCATTGACTTTGCTAATGCTTGCATCGTTCTTCATTTGGTGGGAGGATATCAGATTTACTGTCAGCCAATATATAGTGCAGCAGATAGATGGTGTTCAAGAAAATACCCCAACAGTGGCTTTGTGAATAATTTCTACAGATTGAAACTGCCTTTGTTGCCAGCTTTTCAGCTAAACATGTTCAGGATATGTTTTAGAACAGTCTATGTGATTTCCACCACTGGACTTGCAATTCTGTTTCCTTACTTCAATCAAGTTCTAGGAGTGTTAGGAGCCTTAAGCTTTTGGCCATTGGCTATATATTTCCCAGTAGAGATGTACTTTGTGCAGAATAAAATTGAAGCATGGTCTAGAAAATGGGTTGTTCTTAGGATGTTTAGCTTTGTTTGCTTTCTTGTGACAGTAATGGGTCTCATTGGATCACTTGAAGGAATCATAAGTGAGAAACTAAGCTGA 1395 0.4215 MGGEAIEEPLIQGSPSKDVSGEEPLRRTGDVWSAAAHIITGVIGAGVLSLAWSVAQLGWIAGPLVILLFAATTLISTYLLSDCYRFPHPEYGTIRSSSYMGAVKLYLGEIREKVCGVLVHATLYGTTTAYVITSAISIRAILKSNCYHKEGHQAPCKYGDSVYMILFGLVQVVMSFIPDLHNMAWVSVVAAIMSFTYSSIGLGLGITTVIENGRIMGSVTGVPTSNIADKLWLVFQALGDIAFAYPYTVILLEIQDTLESPPPENKTMKKASVIAIFITTFFYLCCACFGYAAFGNQTPGNLLSGFGFYEPYWLIDFANACIVLHLVGGYQIYCQPIYSAADRWCSRKYPNSGFVNNFYRLKLPLLPAFQLNMFRICFRTVYVISTTGLAILFPYFNQVLGVLGALSFWPLAIYFPVEMYFVQNKIEAWSRKWVVLRMFSFVCFLVTVMGLIGSLEGIISEKLS* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00151 464 PANTHER OS05G0424000 PROTEIN-RELATED 29 454 - -
Rops9g00151 464 Pfam Transmembrane amino acid transporter protein 28 459 IPR013057 -
Rops9g00151 464 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00151 Rops-Chr9 1847228 1859340 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g00151 5 446 Organic Solute Cotransporters AT1G77380 51.802 4.05e-174 495
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00151 K24917 - gmx:100786621 754.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g00151 9 1847228 1859340 Rops9g00151 9 1847228 1859340 ECH
Rops11g02504 11 42670090 42673127 Rops9g00151 9 1847228 1859340 PCT
Rops9g00151 9 1847228 1859340 Rops11g02505 11 42681230 42685359 PCT