Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02505 ATGGATGTGAAAAACTCTCTCCAAATAACTAGAAGTGCTTCTGGTGCTTATGATGATGATGGACATCCCAAAAGAACTGGAACTTTAAGCAGTGCTGTGGCTCATATCATTACTGCTGTTATTGGTTCTGGTGTTCTGTCTCTTGCATGGAGTACTTCACAACTAGGATGGATTGGAGGGCCAGTTGCTTTGCTTTGCTTTGCAATTATCACCTATATTTCTTCATTCATCATGTCTGATTGTTATAGAAATCCTGATCCTGTAACTGGGAAAAGAAACTACTCCTACATGGATGCTGTTAGAGTCAATCTTGGTAAGAGAAGGACATGGTTGGCTGGTTTCCTTCAATTTTTGACCTTGTATGGGACTTGTATTGCTTATGTACTTACAACAGCAAATAGTCTGAGGGCTATTCTGAGATCAAATTGTTATCACAAGGAAGGGCATCATGCTGACTGTAATTATGGGGGTAATTTGTATATGATGCTGTTTGGACTTGTTCAGATTGTAATGTCATTCATACCAGATCTCCACAACATGACATGGGTTTCAGTTGTTGCTGCAATTATGTCCTTTACATATTCATTCATTGGACTAGGACTTGGCATAGCAACAGTCATAGAAAATGGAAGAATTAAGGGAAGCCTAACAGGAGTACCAACTGCAAATATTGCTGACAAGTTATGGTCAGTGTTCCAAGCACTTGGTGACATTGCATTTGCCTATCCATACGCAATTATCCTTCTTGAGATACAGGACACACTAGAGTCTCCTCCACCAGAGAATCAAACCATGAAAAAGGCCTCCATGGCTGCAATCTTCATTACAACATTCTTCTACCTTTGTTGTGGATGCTTTGGATACGCAGCTTTTGGAAATGCTACACCAGGAAATCTCTTGACAGGGTTTGGGTTTTATGAGCCTTATTGGCTTGTTGACCTTGCTAATGCTTGCATTATTCTTCATTTGGTGGGAGGATATCAGATTTACTGCCAGCCAATATATAGCGCTGTTGATAGATGGTGTTCAAGAAAATTCCCAAACAGTGGCTTTGTGAATAATTTCCATGAAGTGAAACTGCCTAAGTTGCCCGGTTTTCAGCTAAACCTTTCCAGGTTCTGTTTTAGAACAGCCTATGTGATTTCAACCACTGGACTTGCAATCTTGTTTCCTTACTTCAACCAAGTTCTAGGATTGTTAGGAGCCATTAACTTTTGGCCATTGGCTATATATTTCCCAGTAGAGATGTACTTTGTGCAGAAGAAAATTGAAGCTTGGACTAGAAAATGGATTGTTCTCAGGACATTTAGCTTTGTTTGCTTTCTTGTCACAGTAATGGGTCTGGTAGGGTCACTTGAAGGAATCATACATGAGAAACTTAGCTGA 1386 0.4004 MDVKNSLQITRSASGAYDDDGHPKRTGTLSSAVAHIITAVIGSGVLSLAWSTSQLGWIGGPVALLCFAIITYISSFIMSDCYRNPDPVTGKRNYSYMDAVRVNLGKRRTWLAGFLQFLTLYGTCIAYVLTTANSLRAILRSNCYHKEGHHADCNYGGNLYMMLFGLVQIVMSFIPDLHNMTWVSVVAAIMSFTYSFIGLGLGIATVIENGRIKGSLTGVPTANIADKLWSVFQALGDIAFAYPYAIILLEIQDTLESPPPENQTMKKASMAAIFITTFFYLCCGCFGYAAFGNATPGNLLTGFGFYEPYWLVDLANACIILHLVGGYQIYCQPIYSAVDRWCSRKFPNSGFVNNFHEVKLPKLPGFQLNLSRFCFRTAYVISTTGLAILFPYFNQVLGLLGAINFWPLAIYFPVEMYFVQKKIEAWTRKWIVLRTFSFVCFLVTVMGLVGSLEGIIHEKLS* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02505 461 Pfam Transmembrane amino acid transporter protein 26 456 IPR013057 -
Rops11g02505 461 PANTHER OS05G0424000 PROTEIN-RELATED 31 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02505 Rops-Chr11 42681230 42685359 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02505 18 443 Organic Solute Cotransporters AT1G77380 54.907 0.0 522
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02505 K24917 - gmx:100818535 825.854
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g00151 9 1847228 1859340 Rops11g02505 11 42681230 42685359 PCT