Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02504 ATGAACATGGATGTGAGAAACTCTCTCCAGATAACTACAAGTGCTTCCGGTGCTTTTGATGATGATGGGCATGCAAAAAGGACTGGAACTTTAAGGAGTGTTGTGGCTCATATCATTACCGCTGTTATTGGTTCTGGTGTTCTAAATCCTGATCCTGTCACTGGGAAAAGAAACTACTCATACATGGATGCTGTTAGTGTCAATCTTGGTAAGAGAAGGACATGGCTGGCTGGTTTCCTTCAATTTTTGATGTTATATGGGACTAGTATTGCTTATGTAATTACCACAGCAACCAATCTGAGGGCGATTCTGAAATCAAATTGCTTTCACAAGGATGGGCATCAGGCTCCTTGTAGTTATGGGGGTAATTTGTATATGGTGCTGTTTGGACTTGTTCAGATTGTAATGTCATTCATACCGGATCCCCACAACATGACATGGGTTTCAGTTGTTGCTGCAATTATGTCCTTTACATACTCATTCATTGAACTAGGACTTGGCATAGCAACAGTCATAGAAAATGGAAGAATTATGGGGAGCGTAACTGTAGACCCAGCTGCAAATATTGCTGGCAAGTTATGGTTAGTCTTCCAAGCACTTGGTGCATTGCATTTGCCTGTCCATATGCATTTCTCCTTCTTGAGATACAGGACACTCTAG 660 0.4167 MNMDVRNSLQITTSASGAFDDDGHAKRTGTLRSVVAHIITAVIGSGVLNPDPVTGKRNYSYMDAVSVNLGKRRTWLAGFLQFLMLYGTSIAYVITTATNLRAILKSNCFHKDGHQAPCSYGGNLYMVLFGLVQIVMSFIPDPHNMTWVSVVAAIMSFTYSFIELGLGIATVIENGRIMGSVTVDPAANIAGKLWLVFQALGALHLPVHMHFSFLRYRTL* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02504 219 PANTHER OS05G0424000 PROTEIN-RELATED 55 211 - -
Rops11g02504 219 Pfam Transmembrane amino acid transporter protein 54 202 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02504 Rops-Chr11 42670090 42673127 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02504 13 201 Organic Solute Cotransporters AT1G77380 43.860 2.75e-54 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02504 K24917 - gmx:100816934 317.005
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g02504 11 42670090 42673127 Rops11g02504 11 42670090 42673127 ECH
Rops11g02504 11 42670090 42673127 Rops9g00151 9 1847228 1859340 PCT