Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03910 ATGAGTGAAGAAGCAAGAAACGAACGGCGGGTCATGGTGGCCGTGGACGAAGGTGAGGAGAGCATGTACGCACTTTCTTGGTGCCTCAACAACATGGTTATCCAAAATTCCAAAGATACCCTTATCCTTCTATACGTCAAACCCCCACATGCCGTTTATACCCGTTTAGATGGCACAGGCAGGGTCGATGATCCTGAACCTCAAGGACATTTATTTTCCTCGGACATAAGCGCAGCCATGGAGAGATATAGCCAAGAAGTGGCTGATTGTGTCCTAAACAAAGCCAAGAAATTGTGTAAAGATCTTCAACAAGTTAAGGTGGAAACAAGAGTAGAGAATGGTGACCCGAGGGACGTGATCTGTGCCATGTCTGTAAAATTGGCTGCTGATGTCCTAGTCATGGGAAGCCGCGGCCATGGTCTCATCCAGAGGGGTTTCCTTGGAAGTGTGAGCAATTACTGTGCACAGAACGTGAAGTGCCCGGTTTTGATAGTCAAGAAGCCAAAAGCAACAACTGCCGGTGCTGGAGACATAGACTTCTTATGA 546 0.4762 MSEEARNERRVMVAVDEGEESMYALSWCLNNMVIQNSKDTLILLYVKPPHAVYTRLDGTGRVDDPEPQGHLFSSDISAAMERYSQEVADCVLNKAKKLCKDLQQVKVETRVENGDPRDVICAMSVKLAADVLVMGSRGHGLIQRGFLGSVSNYCAQNVKCPVLIVKKPKATTAGAGDIDFL* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03910 181 PRINTS Universal stress protein signature 126 138 IPR006015 -
Rops8g03910 181 PRINTS Universal stress protein signature 144 166 IPR006015 -
Rops8g03910 181 PRINTS Universal stress protein signature 8 26 IPR006015 -
Rops8g03910 181 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 8 167 - -
Rops8g03910 181 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 9 168 - -
Rops8g03910 181 CDD USP_Like 10 165 - -
Rops8g03910 181 Coils Coil 92 112 - -
Rops8g03910 181 Gene3D HUPs 3 177 IPR014729 -
Rops8g03910 181 Pfam Universal stress protein family 9 166 IPR006016 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03910 Rops-Chr8 80122823 80124161 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03910 - - gmx:100804158 272.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03910 8 80122823 80124161 Rops6g02084 6 38933774 38934804 ECH
Rops8g03910 8 80122823 80124161 Rops8g03910 8 80122823 80124161 ECH
Rops8g03910 8 80122823 80124161 Rops6g01929 6 37099105 37100216 PCT