Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02084 ATGATGGAAACGAAAGAGCGAAGGATTATGGTGGCTGTGGATGAGAGCCAGGAGAGCATGTATGCTCTGTCTTGGTGCATCAACAATCTTGTTTCTGATACCAACAACAACAACAACAACAACAAGCTTGTGCTGCTTTATGTCAGGCCACCTTCTGCTGTCTACTCCTTTGATGCTGCAGGGTATATCTTTTCCGATGATGTTATTGATGCTATGGAAAAGTACAGTATGCAGTTAGCTAACTCAGTGATGAGAAGAGCTGAAGCTATTTGCAGCAACTTAAACGCTACCAGTGTCAATATGGAGAAAGTAGTTGGGATAGGAGATGCAAAGAGTGTAATATGTGGGGCAGTTCAGAAACTAGATGCTGACACCTTGGTCATGGGAAGTCATGGCTATGGATTCTTTAAGAGGGCAATCCTTGGAAGTGTCAGTGATCACTGTGTCAAGCATGCTAAGTGTCCTGTTGTAATTGTGAAACATCCATAA 489 0.4294 MMETKERRIMVAVDESQESMYALSWCINNLVSDTNNNNNNNKLVLLYVRPPSAVYSFDAAGYIFSDDVIDAMEKYSMQLANSVMRRAEAICSNLNATSVNMEKVVGIGDAKSVICGAVQKLDADTLVMGSHGYGFFKRAILGSVSDHCVKHAKCPVVIVKHP* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02084 162 Pfam Universal stress protein family 7 160 IPR006016 -
Rops6g02084 162 CDD USP_Like 8 159 - -
Rops6g02084 162 PRINTS Universal stress protein signature 6 24 IPR006015 -
Rops6g02084 162 PRINTS Universal stress protein signature 120 132 IPR006015 -
Rops6g02084 162 PRINTS Universal stress protein signature 138 160 IPR006015 -
Rops6g02084 162 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 6 161 - -
Rops6g02084 162 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 7 161 - -
Rops6g02084 162 Gene3D HUPs 1 162 IPR014729 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02084 Rops-Chr6 38933774 38934804 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02084 - - gmx:100306535 247.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03910 8 80122823 80124161 Rops6g02084 6 38933774 38934804 ECH
Rops6g02084 6 38933774 38934804 Rops6g02084 6 38933774 38934804 ECH