Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01929 ATGGCTGACATTGCAGAAAACGAAAGGAGGATCATGGTGGCTGTGGATGAAGGTGAGGTGAGCATGTATGCTCTCTCATGGTGCCTGAAGAACCTGATTTTCCGAAACTCCAAAGACACCCTTATTCTCCTCTACGTCAAGCCTCCTCGTGCCGTTTATGCGGCCTTTGATGGCACAGGATACCTGTTTTCCTCTGACATAACGGCAACCATGGAGAAGCATAGCCAACAAATGGCCGATTGCGTCTTAGAGAAAGCCAAGAGATTGTGTAACAGCTTCGAAAATGTGGAGACAAGGGTAGAGAGTGGGGACCCGAGGGACGTGATCTGTCAAATGGTTCAAAGGTTGGGTGTTGATATCTTAGTCATGGGAAGCCATGGCTATGGTGTCATCAAGAGGGCTTTCCTTGGAAGCGTGAGCAATCACTGCGCACAGAACGTCAAGTGCCCAGTTATGATAGTGAAGAAGCCAAAATCAACCGCTGGAGACATATAA 495 0.4828 MADIAENERRIMVAVDEGEVSMYALSWCLKNLIFRNSKDTLILLYVKPPRAVYAAFDGTGYLFSSDITATMEKHSQQMADCVLEKAKRLCNSFENVETRVESGDPRDVICQMVQRLGVDILVMGSHGYGVIKRAFLGSVSNHCAQNVKCPVMIVKKPKSTAGDI* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01929 164 CDD USP_Like 10 154 - -
Rops6g01929 164 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 9 157 - -
Rops6g01929 164 Pfam Universal stress protein family 9 155 IPR006016 -
Rops6g01929 164 Gene3D HUPs 2 163 IPR014729 -
Rops6g01929 164 PRINTS Universal stress protein signature 115 127 IPR006015 -
Rops6g01929 164 PRINTS Universal stress protein signature 8 26 IPR006015 -
Rops6g01929 164 PRINTS Universal stress protein signature 133 155 IPR006015 -
Rops6g01929 164 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 8 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01929 Rops-Chr6 37099105 37100216 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01929 - - gmx:100305594 283.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g01929 6 37099105 37100216 Rops6g01929 6 37099105 37100216 ECH
Rops8g03910 8 80122823 80124161 Rops6g01929 6 37099105 37100216 PCT