Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03640 ATGCAAGGGAGATGTCAGGCCATGAGGCGTGTGGTCGTCACAAGTGGGGGGCATGCTAGATGCATGGGGTTGCATGGCCATCACATGTGGGATTCATGCACTAGAATTTTTGCACCTGGTGCTTCTGCAAGTCAGGCCCCAAATGCAAGCCAAGGACCATTTGCAACTGTTCAGCCATCTGAAATTGGACCTCCAGTAGGATTTGTCCTTATTTTTGGTATGAGGCCCCCACCTATTAGATCTCCACGCTTGGCTCCTTTGTCAACAACTCAAAGTCCAGTCGGATCATTCCCATTCTCACCAATTTCAGATGTTTATTCTTCCATATGTGTGAAACTATCCATTGTCATCTACCAGAATAAACCAGCTGCAACTGGTATAAATAGACCTCCTCTTGATCTCAAGTTCCACATAGCAAATCAAACCAAATTCTTCAATTCACTTAAAGCATTTAGTTACCCAAATTCTTCAATTCACTTAAATCATATAATAGCAATGGATGTGTTGACAACATTGACTGTTGACAAGCCAGTGGTGATCTTCAGCAAGAGCACTTGTTGCATGAGTCACACTGTGAAGGCTCTCATATGCAGCTTTGGTGCTAACCCTGCAGTTATTGAGGTTGACAAAATGCCAAATGGGCAACAAGTAGAGAGGGCACTGCTTCAACTAGGTTGCCGCCCAAGTGTACCTGCAGTGTTCATAGGACAACAATTTATAGGTGGTGCTGATGAAGTCATAAGCCTCAATGTTCAAAACAAGCTTGCCCAATTGCTTCTAAGGGCTAGAGCTATATTTCTCTGGAGTGGGTAG 813 0.4416 MQGRCQAMRRVVVTSGGHARCMGLHGHHMWDSCTRIFAPGASASQAPNASQGPFATVQPSEIGPPVGFVLIFGMRPPPIRSPRLAPLSTTQSPVGSFPFSPISDVYSSICVKLSIVIYQNKPAATGINRPPLDLKFHIANQTKFFNSLKAFSYPNSSIHLNHIIAMDVLTTLTVDKPVVIFSKSTCCMSHTVKALICSFGANPAVIEVDKMPNGQQVERALLQLGCRPSVPAVFIGQQFIGGADEVISLNVQNKLAQLLLRARAIFLWSG* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03640 270 Gene3D Glutaredoxin 167 266 - -
Rops8g03640 270 PRINTS Glutaredoxin signature 223 236 IPR014025 -
Rops8g03640 270 PRINTS Glutaredoxin signature 178 196 IPR014025 -
Rops8g03640 270 PRINTS Glutaredoxin signature 237 250 IPR014025 -
Rops8g03640 270 Pfam Glutaredoxin 178 240 IPR002109 -
Rops8g03640 270 NCBIfam glutaredoxin-like family 171 266 IPR011905 -
Rops8g03640 270 ProSiteProfiles Glutaredoxin domain profile. 166 266 - -
Rops8g03640 270 CDD GRX_GRXh_1_2_like 177 258 - -
Rops8g03640 270 PANTHER GLUTAREDOXIN 166 266 IPR011905 -
Rops8g03640 270 SUPERFAMILY Thioredoxin-like 167 263 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03640 Rops-Chr8 76589851 76597038 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03640 166 267 Miscellaneous Gene Families AT4G15690 50.000 2.29e-32 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03640 K03676 - gmx:100803979 192.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03640 8 76589851 76597038 Rops6g02186 6 40284265 40284582 PCT
Rops6g02187 6 40302929 40303237 Rops8g03640 8 76589851 76597038 PCT