Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02187 ATGGACATTATCACAAGCATGGTGACTGATAAGCCTGTGGTGATATTCAGCAAGAGCACCTGTTGCATGAGCCATTCCATCACATCACTGATACGAAGCTTTGGGGCAAACCCAACTGTTTACGAGCTTGATGAAATGACAAATGGGCAGCAGATTGAAAGGGCACTGATTCAAATGGGGTGCCAACCAAGTGTACCAGCTGTGTTTATAGGGCAACAATTCGTTGGTGGCTCTAAAAGAATCATGAGCCTGCATCTTCGGAGTGAGTTAGTACCACGGTTGATGAATGCCAGAGCTATATGGATTTGA 309 0.4531 MDIITSMVTDKPVVIFSKSTCCMSHSITSLIRSFGANPTVYELDEMTNGQQIERALIQMGCQPSVPAVFIGQQFVGGSKRIMSLHLRSELVPRLMNARAIWI* 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02187 102 CDD GRX_GRXh_1_2_like 12 92 - -
Rops6g02187 102 PANTHER GLUTAREDOXIN 1 102 IPR011905 -
Rops6g02187 102 SUPERFAMILY Thioredoxin-like 2 101 IPR036249 -
Rops6g02187 102 Pfam Glutaredoxin 13 75 IPR002109 -
Rops6g02187 102 PRINTS Glutaredoxin signature 58 71 IPR014025 -
Rops6g02187 102 PRINTS Glutaredoxin signature 72 85 IPR014025 -
Rops6g02187 102 PRINTS Glutaredoxin signature 13 31 IPR014025 -
Rops6g02187 102 ProSiteProfiles Glutaredoxin domain profile. 1 101 - -
Rops6g02187 102 Gene3D Glutaredoxin 2 100 - -
Rops6g02187 102 NCBIfam glutaredoxin-like family 5 102 IPR011905 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02187 Rops-Chr6 40302929 40303237 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02187 1 102 Miscellaneous Gene Families AT4G15690 55.882 4.20e-42 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02187 K03676 - gmx:100811394 187.963
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g02187 6 40302929 40303237 Rops6g02187 6 40302929 40303237 ECH
Rops6g02187 6 40302929 40303237 Rops8g03640 8 76589851 76597038 PCT