Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02186 ATGGATTTGCTAGCAACGTTGACTGCTGAGAAGCCAGTGGTGATCTTCAGCAAGAGCACTTGTTGCATGGGGTATTCTGTGAAGGCTCTCATATGCAGCTTTGGTGCCAACCCTACAGTTATTGAGATTGACAAAATGGCAAATGGTCAGCAAATAGAGAGGGCACTAGTTCAGCTTGGTTGCCGCCCAAGTGTACCAGCAGTGTTCATAGGACAACAATTTATAGGTGGTGCTGATGAAGTCATAAGCCTTAACGTCCAAAACAAGCTTGCCCCGTTGCTTTTAAGTGCTAGAGCTATATTTATCTGGAGTCGATAG 318 0.4528 MDLLATLTAEKPVVIFSKSTCCMGYSVKALICSFGANPTVIEIDKMANGQQIERALVQLGCRPSVPAVFIGQQFIGGADEVISLNVQNKLAPLLLSARAIFIWSR* 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02186 105 SUPERFAMILY Thioredoxin-like 2 99 IPR036249 -
Rops6g02186 105 Pfam Glutaredoxin 13 75 IPR002109 -
Rops6g02186 105 Gene3D Glutaredoxin 2 102 - -
Rops6g02186 105 PRINTS Glutaredoxin signature 58 71 IPR014025 -
Rops6g02186 105 PRINTS Glutaredoxin signature 13 31 IPR014025 -
Rops6g02186 105 PRINTS Glutaredoxin signature 72 85 IPR014025 -
Rops6g02186 105 CDD GRX_GRXh_1_2_like 12 93 - -
Rops6g02186 105 NCBIfam glutaredoxin-like family 6 101 IPR011905 -
Rops6g02186 105 ProSiteProfiles Glutaredoxin domain profile. 1 101 - -
Rops6g02186 105 PANTHER GLUTAREDOXIN 2 101 IPR011905 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02186 Rops-Chr6 40284265 40284582 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02186 1 102 Miscellaneous Gene Families AT4G15700 48.039 2.72e-35 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02186 K03676 - gmx:100803979 183.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g02186 6 40284265 40284582 Rops6g02186 6 40284265 40284582 ECH
Rops8g03640 8 76589851 76597038 Rops6g02186 6 40284265 40284582 PCT