Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03597 ATGGAGCATCAACAATCAAGGGTTGAAACGATTGAGAAATTCACGTGGAAGATTGAGAAATTCTCTCACTTGAACACCAAGAAGCTTTACTCTGAGACTGTCATCATGGGTGGTTATCCATGGAGGATTCTTCTTTATCCACGTGGGAACCAAGTGGACGACTTGTCAATTTATTTGGATGCTGTTAGCTCTGCTCAGTTGCCTAAGGGATGGAGCAGAGTTGTGAAATTCAGGTTAGCTGTATTGAATCAAGTCGACAGCAGCATGACAATCACAAGAGAGTTTGACCACGAGTTCAATGCAAGGGATGACGACTGGGGTTTTACATCTTTTTTGTCTTTAAGGGAACTTCGTGATCCTCACAAAGGGTTTCTTGTGGAGGATACTTGTATTGTTATTGCAGAGGTTTATTTTCCTAAGTCACATGAAAATGCAGTGAATCAAGCTGCTAGTACAACTGGCTCCTTAACATCCGGAGGTCAAGCTAGAAATATAGAAGTGGAGACCCCAAGGCCAGAAGGTCAAGATCGAGATATGGAAACTCTTTCACCGTTTTCTACATTAGTTTTTACTGAGCCTGTTGATATGGGAATGTCTTCGGCCTCAACTGGTGAGCTTATGGATTTCAGGGGTTTAGGGAAAATAGAAAAAGCTTTTGTTCCACTACTAGAAGAAGTATGTTCTCAGCATCCATCACTTATTGAGTGCCAGCAAAACAGAAGTCACAGATTTATTGAATGGGCGTTCACTGCTTTAGGCAGAGTTCTTCATTTCCTCAAGACTAGAAAGGTTAAAGATATGAATGACCTAACTTGTAAGGATCTTCAAATTCTATGGGAAGAACTTGAAACATTTAGATTTGATCTAACTTGGCTAGAGCCCCATGTTCAATCCGCATTAGGCATCAAAAGTTATGTGGAGAGAGCAACGCAAGTGGAAAAGTTGAAGGAGAATGTGGTAGCTGTAGAGTTGGAAATGAAGGCAAAGGTAGTTGCTGCTAAGGTGAATCTTGATAGAGCAAGAGACTTGTTGAAAGCAGAAGGCTATGAAGAGAAAGATTTGGATGCTGAATTAGGATATGGGATATCATAA 1092 0.4093 MEHQQSRVETIEKFTWKIEKFSHLNTKKLYSETVIMGGYPWRILLYPRGNQVDDLSIYLDAVSSAQLPKGWSRVVKFRLAVLNQVDSSMTITREFDHEFNARDDDWGFTSFLSLRELRDPHKGFLVEDTCIVIAEVYFPKSHENAVNQAASTTGSLTSGGQARNIEVETPRPEGQDRDMETLSPFSTLVFTEPVDMGMSSASTGELMDFRGLGKIEKAFVPLLEEVCSQHPSLIECQQNRSHRFIEWAFTALGRVLHFLKTRKVKDMNDLTCKDLQILWEELETFRFDLTWLEPHVQSALGIKSYVERATQVEKLKENVVAVELEMKAKVVAAKVNLDRARDLLKAEGYEEKDLDAELGYGIS* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03597 363 SUPERFAMILY TRAF domain-like 13 142 - -
Rops8g03597 363 PANTHER TRAF-LIKE SUPERFAMILY PROTEIN 11 341 - -
Rops8g03597 363 Pfam MATH domain 18 136 IPR002083 GO:0005515
Rops8g03597 363 CDD MATH 13 136 IPR002083 GO:0005515
Rops8g03597 363 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 9 155 IPR008974 GO:0005515
Rops8g03597 363 SMART math_3 13 117 IPR002083 GO:0005515
Rops8g03597 363 ProSiteProfiles MATH/TRAF domain profile. 11 136 IPR002083 GO:0005515
Rops8g03597 363 FunFam Ubiquitin carboxyl-terminal hydrolase 13 9 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03597 Rops-Chr8 76068481 76071076 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03597 - - tpra:123890263 392.504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03597 8 76068481 76071076 Rops8g03597 8 76068481 76071076 ECH
Rops8g03597 8 76068481 76071076 Rops9g00656 9 9287876 9350860 ECH
Rops6g00742 6 19058106 19059541 Rops8g03597 8 76068481 76071076 PCT