Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00656 ATGCAAATCCAGAATTTTGGGGAACCCTTTTTATTGGTCATACAAGACGGTGAGACTTTAGCTGAAATCAAAGTGCGGATTCAAAAAAAACTTCGAATTCCTGATAATGAGTTTGTCAAGTGGAAATTTGCTTTTATTTCAATCTCTCATAGTGAGTATCTTCAGGACTCTGACATTGTATCCAGTCGTTTTGAGAGAAGAAATGTTTATGGTGTTTGGAACTGGTATCTTGGCTTGGAGCATACTGACAATGCTCCAAAAAGATCATATGCTGTTAATCAGGAAAGGTTGATGGAAGAACAGGTAGAAAAAGAGCACAAAACGAAAGAAAAGACAGAGGCTAACCTCTATACTATTATAAAGTTGGCCCGAGATGAAGACCTTCGAGAGCATATTGGAAATGATATAGATTATGGTCTCGTGGTCCATGACAAAGTGAAGAGTTTCCGTGTCCGAAAGCAGTTATCATTTAACCATTTCAAGGAAGAGGTTGCTAAAGAGTTTGGCATACCGGTTCAATTCCAGCGCTTTTGGCTTTGGACAAAGCGTGCAGACCATTCCTATCATCCTGATTGGCCATTGACACACGATGAGGAAGCACAATCTGTTGAACAATTGAGTTTGTTATCCAACGAGGTTCATGATGGAGAATTAAAATTGTTTTTGGAAGTGGAGCTTGGGCCGGATTCACGCCCCATTCTGCCACCTGAAAAGACAAAGGATGATATATTACTTTTTTTCAAGTTATGTGATCCCGAAAAGGAGGTGTTACGTTACGTTGGAAGGCTCTTAGTGAAGAGTACTAGCAAGCCATCAGAAATCTTAAAAAGGTTAAATGAAATGGCTGGTTATGATCCTGGCGAAGAGATTGAACTTTGTCAGGAAGTTTGGTTTAATCCAAATGACCTGTGGAAACCTATTGACAAGAAATTAACATTTCATGCAAGCGAGCTACAAGATGGAGATATTGTATGGTTTAGGAAAGCTCCTGCTATGGATAATGAGGAACATGTCAGCCATCCAGATGTGCTTCCATTCACAGAATTGGAGCACAATGGCCAGGAAAGGTTGATGGAAGAACAGGAAGAAAAAGAGCGCAAAACGAAAGAAAAGACAGAGGCTCACCTCTATACTATTATAAAGTTGGCCCGAGATGAAGACCTTCGAGAGCATATTGAAAATGATATAGATTATGGTCTCGTAGTCCATGACAAAGTGAAGAGTTTCCGTGTCCGAAAGCAGATATCATTTAACCATTTCAAGGAAGAGGTTGCTAAAGAGTTTGGCATACCAGTTCAATTCCAGCGCTTTTGGCTTTGGACAAAGCGTTCAGACCATTCCTATCATCCTGATTGGCCATTGACACACGATGAGGAAGCACAATCTGTTGGACAATTGAGTTTGTTATCCAACGAGGTTCATGATGGAGAATTAAAATTGTTTTTGGAAGTGGAGCTTGGGCCGGATTCACGTCCCATTGCGCCACCTGAAAAGACAAAGGATGATATATTGCTTTTTTTCAAGTTATGTGATCCCGAAAAGGAGGTGTTACGTTACGTCGGAAGGCTCTTAGTGAAGAGTACTAGCAAGCCATCAGAAATCTTTAAAAGGTTAAATGAAATGGCTGGTTATGATCCTGACGAAGAGATTGAACTTTGTCAGGAAGTTTGGTTTAATCCAAATGACCTGTGGAAACCTATTGACAAGAAATTAACATTTCATGCAAGCGAGCTACAAGATGGAGATATTGTAGGCTTTCGGAAAGCTTCTGCTACGGATAATGAGGAACATGTCAGCCATCCAGATGTGCCTTCAAACACAGAATTGGAGCACGATGGCCAGGCTGTTATGATGAACCAACAAAGGGAAATGGGAAATGATAGATGCCGACCATTGATGCATGCTGGGCCTCCTATGGGTGTCAATTATATGTATCCTCCGACCAATGACGTGCCTTCATACACAGAATATGTGCACAATGTCGAGGCTGCTATGATGAACCAACAAAGGCCAATGGGAAATGATAGATTCCAACCAATGATGTATGAAATCGATTTTATTGAACAGATTGTTTGCGCAGTCTATGATAATGTAGATAGTCAACCTTTATATACTGGTCAGAAACCAGTTGGACTTGAGCACTGGACACAAGTAGTGGAGCCCCTTAAAGACATGAAACCTAACGAGGATACGGGAGATACTGATCGTCTTTATTGGCATAAGTATCTGGGCTTGGAGCATACTGACAATGCTCTTAAAAGATGA 2265 0.4088 MQIQNFGEPFLLVIQDGETLAEIKVRIQKKLRIPDNEFVKWKFAFISISHSEYLQDSDIVSSRFERRNVYGVWNWYLGLEHTDNAPKRSYAVNQERLMEEQVEKEHKTKEKTEANLYTIIKLARDEDLREHIGNDIDYGLVVHDKVKSFRVRKQLSFNHFKEEVAKEFGIPVQFQRFWLWTKRADHSYHPDWPLTHDEEAQSVEQLSLLSNEVHDGELKLFLEVELGPDSRPILPPEKTKDDILLFFKLCDPEKEVLRYVGRLLVKSTSKPSEILKRLNEMAGYDPGEEIELCQEVWFNPNDLWKPIDKKLTFHASELQDGDIVWFRKAPAMDNEEHVSHPDVLPFTELEHNGQERLMEEQEEKERKTKEKTEAHLYTIIKLARDEDLREHIENDIDYGLVVHDKVKSFRVRKQISFNHFKEEVAKEFGIPVQFQRFWLWTKRSDHSYHPDWPLTHDEEAQSVGQLSLLSNEVHDGELKLFLEVELGPDSRPIAPPEKTKDDILLFFKLCDPEKEVLRYVGRLLVKSTSKPSEIFKRLNEMAGYDPDEEIELCQEVWFNPNDLWKPIDKKLTFHASELQDGDIVGFRKASATDNEEHVSHPDVPSNTELEHDGQAVMMNQQREMGNDRCRPLMHAGPPMGVNYMYPPTNDVPSYTEYVHNVEAAMMNQQRPMGNDRFQPMMYEIDFIEQIVCAVYDNVDSQPLYTGQKPVGLEHWTQVVEPLKDMKPNEDTGDTDRLYWHKYLGLEHTDNALKR* 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00656 754 FunFam Ubiquitin carboxyl-terminal hydrolase 13 235 352 - -
Rops9g00656 754 FunFam Ubiquitin carboxyl-terminal hydrolase 13 495 612 - -
Rops9g00656 754 Pfam ICP0-binding domain of Ubiquitin-specific protease 7 175 355 IPR024729 -
Rops9g00656 754 Pfam ICP0-binding domain of Ubiquitin-specific protease 7 435 608 IPR024729 -
Rops9g00656 754 Gene3D - 495 609 - -
Rops9g00656 754 Gene3D - 235 350 - -
Rops9g00656 754 Coils Coil 351 374 - -
Rops9g00656 754 Pfam Ubiquitin-specific protease C-terminal 4 85 IPR029346 -
Rops9g00656 754 PANTHER LARGE PROLINE-RICH PROTEIN BAG6 404 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00656 Rops-Chr9 9287876 9350860 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00656 K11838 - sstn:125866854 509.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g00656 9 9287876 9350860 Rops9g00656 9 9287876 9350860 ECH
Rops8g03597 8 76068481 76071076 Rops9g00656 9 9287876 9350860 ECH