Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g00742 ATGGTGAATGAGGTGGCAACTTGTGCTGGTTTTGAGAAATTCACATGGAGAATTGAAGATTTCTCAAAACAAAATGGCATGAAATTAAGATCCAAGGCTTTCAAAATCCGCGGTTATACATGGAGGATCCTTGTGCATCCATTGAGGAGGGATGTGAACCATTTTTCATTGTATTTGATGGTTGCTGATTCTTTACCTCCTTATGGATGGAGCAGAAACACGTTTTTCAAGTTAGCTCTAATTAATCAGATCGATAGGAACAAGTCCATTGTAAAAGAGACTCAGCAAAAGTTCAATGGAGGATATCGTAGCTGGGGTTCCTTTTTCCTGAATCTAAGTGACTTCTATGACCATAAACAAGGGTATCTTGTGAGGAACACATGCATAATTGAAGCTCATATCTGTGTCTCTGATTTTGCACCTAAGATTCAAGACATCAACTCCTTGAACCCAAAGTCAACTCCAACCCATGGCTCTAAATTAGGTGATCAAGCAACAGATCAATCCTCTGATGAGAAGGATACACTTAGTCCCAGAACCTCAGGATCTAGTCCAAGGGAAGGGGAAATCAAAGTTTCAGATTTGACACTAAGTGACCTTATAGATTTGGAGAGTTTAGGACCAGAAGAAGAAGCTTTCATTCCATTATTGGAGGATGTTTGCATATGGCATCCTTCTTTGATACAAAGCCAGAGGAAAAGAAGTCGTTGGTTCAGACAATGGGCATTCACATCTTTGGGCCAAGTTCTACATTTTCTTAAGACAAAGAAGGTGAAGGATATAAGTGAAGAAGATTGCAAGAACCTTCAAAGTTTGTGGGAGGAACTTGTCAAGTCCTCAGGGTTTGACTTGGCTTGGTTGGAGCCTTATGTTCAATCAGCATTGGGAGTGAAAGCTCATTTTTTAAAAGCAAAGAAACTGAGGAAACTCAGAGACTATGTGGTTGCTTTGGAGATTAAAATGAAGAAGCTGAGGGGAGAACTTGCTGCTGCAGAAGCAGAGTTTGAGGTGGCAAGGAAAGGCTTGTCAGAAGTTAGAAAAGGTTTCCAAGAAATGAATATAAATGCTCCAATAGGTTATGCTATGTTTTAG 1092 0.4002 MVNEVATCAGFEKFTWRIEDFSKQNGMKLRSKAFKIRGYTWRILVHPLRRDVNHFSLYLMVADSLPPYGWSRNTFFKLALINQIDRNKSIVKETQQKFNGGYRSWGSFFLNLSDFYDHKQGYLVRNTCIIEAHICVSDFAPKIQDINSLNPKSTPTHGSKLGDQATDQSSDEKDTLSPRTSGSSPREGEIKVSDLTLSDLIDLESLGPEEEAFIPLLEDVCIWHPSLIQSQRKRSRWFRQWAFTSLGQVLHFLKTKKVKDISEEDCKNLQSLWEELVKSSGFDLAWLEPYVQSALGVKAHFLKAKKLRKLRDYVVALEIKMKKLRGELAAAEAEFEVARKGLSEVRKGFQEMNINAPIGYAMF* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g00742 363 Coils Coil 307 341 - -
Rops6g00742 363 CDD MATH 13 134 IPR002083 GO:0005515
Rops6g00742 363 PANTHER TRAF-LIKE SUPERFAMILY PROTEIN 12 338 - -
Rops6g00742 363 SMART math_3 13 115 IPR002083 GO:0005515
Rops6g00742 363 MobiDBLite consensus disorder prediction 148 189 - -
Rops6g00742 363 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 11 145 IPR008974 GO:0005515
Rops6g00742 363 Pfam MATH domain 18 134 IPR002083 GO:0005515
Rops6g00742 363 MobiDBLite consensus disorder prediction 148 165 - -
Rops6g00742 363 ProSiteProfiles MATH/TRAF domain profile. 11 134 IPR002083 GO:0005515
Rops6g00742 363 SUPERFAMILY TRAF domain-like 13 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g00742 Rops-Chr6 19058106 19059541 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g00742 - - gmx:100797919 532.332
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g00742 6 19058106 19059541 Rops8g03597 8 76068481 76071076 PCT